Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Extl2-203ENSMUST00000106502 2840 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Ofcc1-201ENSMUST00000054635 2816 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Nin-202ENSMUST00000085314 9675 ntAPPRIS P4 TSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 9430073C21Rik-201ENSMUST00000145346 2173 ntTSL 2 BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 C8a-203ENSMUST00000106808 3539 ntTSL 2 BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 A830036E02Rik-202ENSMUST00000128904 2768 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Olfr455-202ENSMUST00000217978 4054 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Mettl15-201ENSMUST00000081631 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Olfr12-202ENSMUST00000213247 4158 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Rasef-202ENSMUST00000102837 5158 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 CT025675.1-201ENSMUST00000228171 1567 ntBASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 AC121942.3-201ENSMUST00000225768 1436 ntBASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Fhl1-205ENSMUST00000114773 2298 ntTSL 5 BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Mir705-201ENSMUST00000102058 82 ntBASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Hmgn2-202ENSMUST00000102552 676 ntAPPRIS P2 TSL 2 BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Gm11984-201ENSMUST00000118142 766 ntBASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Gm14869-201ENSMUST00000119007 884 ntBASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Gm7309-201ENSMUST00000121670 581 ntBASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Fam187b-202ENSMUST00000128384 1244 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Gm12126-201ENSMUST00000147717 619 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Gm25219-201ENSMUST00000157545 330 ntBASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Gm4302-201ENSMUST00000168769 927 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Gm6647-201ENSMUST00000170514 641 ntBASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Gm6871-204ENSMUST00000171059 462 ntTSL 5 BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Ank3-208ENSMUST00000182029 3825 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Gm27225-201ENSMUST00000183833 557 ntBASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Gm29214-201ENSMUST00000190216 570 ntBASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Gm7804-202ENSMUST00000194187 854 ntBASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Gm37450-201ENSMUST00000195218 170 ntBASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Gm42429-201ENSMUST00000198579 558 ntBASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Igkv8-22-201ENSMUST00000199501 367 ntBASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Gm43472-201ENSMUST00000200175 154 ntBASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Gm43934-201ENSMUST00000205095 388 ntBASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Gm31497-201ENSMUST00000216981 638 ntTSL 5 BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Gm6362-201ENSMUST00000217686 836 ntBASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 AC167977.1-201ENSMUST00000221384 234 ntBASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 AC130829.2-201ENSMUST00000222931 127 ntBASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 AC154747.2-201ENSMUST00000225109 780 ntBASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Slitrk2-201ENSMUST00000036043 2992 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Krtap7-1-201ENSMUST00000056118 620 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Olfr1535-201ENSMUST00000068163 981 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Gm8394-201ENSMUST00000079684 952 ntBASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Mir185-201ENSMUST00000083530 65 ntBASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Rps18-201ENSMUST00000008812 600 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Mcf2l-208ENSMUST00000110879 3664 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Ndst2-205ENSMUST00000225000 3661 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Gm42648-201ENSMUST00000200774 2505 ntBASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Rnf141-209ENSMUST00000177236 4032 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Gm18537-202ENSMUST00000206215 1503 ntBASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Lyg2-201ENSMUST00000078307 2564 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 9030607J07Rik-201ENSMUST00000202228 1622 ntBASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Olfr353-202ENSMUST00000215925 1615 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Pcdhb7Q8CDY9 Lamb3-202ENSMUST00000159955 4013 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Pcdhb7Q8CDY9 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC8.06□□□□□ -1.12
Pcdhb7Q8CDY9 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC8.06□□□□□ -1.12
Pcdhb7Q8CDY9 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Pcdhb7Q8CDY9 Gm43618-201ENSMUST00000197392 3451 ntBASIC8.06□□□□□ -1.12
Pcdhb7Q8CDY9 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Pcdhb7Q8CDY9 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC8.06□□□□□ -1.12
Pcdhb7Q8CDY9 1700010N08Rik-202ENSMUST00000188166 1323 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Pcdhb7Q8CDY9 A230001M10Rik-202ENSMUST00000196720 1307 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Pcdhb7Q8CDY9 Rad54l-201ENSMUST00000102704 3025 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Pcdhb7Q8CDY9 Gm14415-201ENSMUST00000118260 1578 ntBASIC8.06□□□□□ -1.12
Pcdhb7Q8CDY9 Adgrl2-212ENSMUST00000198779 4592 ntTSL 5 BASIC8.06□□□□□ -1.12
Pcdhb7Q8CDY9 Trim66-202ENSMUST00000106739 9250 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Pcdhb7Q8CDY9 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Pcdhb7Q8CDY9 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms