Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 AC168062.1-201ENSMUST00000228048 769 ntBASIC8.56□□□□□ -1.04
Ccdc60Q8C4J0 AC156016.2-201ENSMUST00000228200 525 ntBASIC8.56□□□□□ -1.04
Ccdc60Q8C4J0 Mir484-201ENSMUST00000093566 67 ntBASIC8.56□□□□□ -1.04
Ccdc60Q8C4J0 Fam19a1-201ENSMUST00000075080 2411 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ccdc60Q8C4J0 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ccdc60Q8C4J0 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ccdc60Q8C4J0 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ccdc60Q8C4J0 Gm42462-201ENSMUST00000196543 1363 ntBASIC8.56□□□□□ -1.04
Ccdc60Q8C4J0 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC8.56□□□□□ -1.04
Ccdc60Q8C4J0 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC8.56□□□□□ -1.04
Ccdc60Q8C4J0 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ccdc60Q8C4J0 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Ccdc60Q8C4J0 Gm42636-201ENSMUST00000197174 2239 ntBASIC8.56□□□□□ -1.04
Ccdc60Q8C4J0 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Ccdc60Q8C4J0 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Gm6820-201ENSMUST00000188803 2173 ntBASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Gm37304-201ENSMUST00000193833 2886 ntBASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Gm8534-201ENSMUST00000118553 766 ntBASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Gm12135-201ENSMUST00000119170 466 ntBASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Gm13724-201ENSMUST00000122395 1155 ntBASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Gm10364-202ENSMUST00000153034 1001 ntBASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Gm23756-201ENSMUST00000157582 114 ntBASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Gm10136-201ENSMUST00000183196 435 ntBASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Gm21048-201ENSMUST00000202470 1166 ntBASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Gm44896-201ENSMUST00000206190 772 ntBASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 AL929555.1-201ENSMUST00000215283 509 ntBASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 AC091237.1-201ENSMUST00000224911 637 ntBASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 AC123917.1-201ENSMUST00000228063 1048 ntBASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Gm44194-201ENSMUST00000204222 3229 ntBASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Ccdc60Q8C4J0 AC139941.2-201ENSMUST00000221565 1824 ntBASIC8.54□□□□□ -1.04
Ccdc60Q8C4J0 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
Ccdc60Q8C4J0 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc60Q8C4J0 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc60Q8C4J0 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc60Q8C4J0 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Ccdc60Q8C4J0 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc60Q8C4J0 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc60Q8C4J0 Gm5454-201ENSMUST00000052030 1453 ntBASIC8.54□□□□□ -1.04
Ccdc60Q8C4J0 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC8.54□□□□□ -1.04
Ccdc60Q8C4J0 Gm13265-201ENSMUST00000118090 421 ntBASIC8.54□□□□□ -1.04
Ccdc60Q8C4J0 Gm12573-201ENSMUST00000118158 286 ntBASIC8.54□□□□□ -1.04
Ccdc60Q8C4J0 Gm13222-201ENSMUST00000119638 138 ntBASIC8.54□□□□□ -1.04
Ccdc60Q8C4J0 Gm14741-201ENSMUST00000120777 1009 ntBASIC8.54□□□□□ -1.04
Ccdc60Q8C4J0 Gm24781-201ENSMUST00000157636 117 ntBASIC8.54□□□□□ -1.04
Ccdc60Q8C4J0 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC8.54□□□□□ -1.04
Ccdc60Q8C4J0 Gm20128-201ENSMUST00000196189 417 ntBASIC8.54□□□□□ -1.04
Ccdc60Q8C4J0 Igkv4-83-201ENSMUST00000196933 334 ntBASIC8.54□□□□□ -1.04
Ccdc60Q8C4J0 Gm43906-201ENSMUST00000203194 906 ntBASIC8.54□□□□□ -1.04
Ccdc60Q8C4J0 Gm9367-201ENSMUST00000205703 546 ntBASIC8.54□□□□□ -1.04
Ccdc60Q8C4J0 Gm44911-201ENSMUST00000208436 1062 ntBASIC8.54□□□□□ -1.04
Ccdc60Q8C4J0 Gm32983-201ENSMUST00000208500 505 ntBASIC8.54□□□□□ -1.04
Ccdc60Q8C4J0 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc60Q8C4J0 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC8.54□□□□□ -1.04
Ccdc60Q8C4J0 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC8.54□□□□□ -1.04
Ccdc60Q8C4J0 Prdm11-202ENSMUST00000111274 11678 ntTSL 5 BASIC8.54□□□□□ -1.04
Ccdc60Q8C4J0 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Ccdc60Q8C4J0 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms