Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm24473-201ENSMUST00000104483 131 ntBASIC6.99□□□□□ -1.29
Sh3rf2Q8BZT2 Gm14116-201ENSMUST00000117733 805 ntBASIC6.99□□□□□ -1.29
Sh3rf2Q8BZT2 Gm15311-201ENSMUST00000119682 282 ntBASIC6.99□□□□□ -1.29
Sh3rf2Q8BZT2 Gm15305-201ENSMUST00000120354 288 ntBASIC6.99□□□□□ -1.29
Sh3rf2Q8BZT2 Gm8722-201ENSMUST00000121466 769 ntBASIC6.99□□□□□ -1.29
Sh3rf2Q8BZT2 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Sh3rf2Q8BZT2 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Sh3rf2Q8BZT2 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC6.99□□□□□ -1.29
Sh3rf2Q8BZT2 Gm23740-201ENSMUST00000157385 100 ntBASIC6.99□□□□□ -1.29
Sh3rf2Q8BZT2 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Sh3rf2Q8BZT2 Gm28583-201ENSMUST00000188903 2141 ntBASIC6.99□□□□□ -1.29
Sh3rf2Q8BZT2 Gm28846-201ENSMUST00000189161 368 ntBASIC6.99□□□□□ -1.29
Sh3rf2Q8BZT2 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC6.99□□□□□ -1.29
Sh3rf2Q8BZT2 Gm37684-201ENSMUST00000192779 355 ntBASIC6.99□□□□□ -1.29
Sh3rf2Q8BZT2 Gm37285-201ENSMUST00000194465 1139 ntBASIC6.99□□□□□ -1.29
Sh3rf2Q8BZT2 AC099760.1-201ENSMUST00000196300 153 ntBASIC6.99□□□□□ -1.29
Sh3rf2Q8BZT2 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Sh3rf2Q8BZT2 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Sh3rf2Q8BZT2 Gm44607-201ENSMUST00000205611 1090 ntBASIC6.99□□□□□ -1.29
Sh3rf2Q8BZT2 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC6.99□□□□□ -1.29
Sh3rf2Q8BZT2 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC6.99□□□□□ -1.29
Sh3rf2Q8BZT2 AC132881.2-201ENSMUST00000225474 709 ntBASIC6.99□□□□□ -1.29
Sh3rf2Q8BZT2 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Sh3rf2Q8BZT2 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Sh3rf2Q8BZT2 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Sh3rf2Q8BZT2 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Sh3rf2Q8BZT2 Gm24621-201ENSMUST00000082679 140 ntBASIC6.99□□□□□ -1.29
Sh3rf2Q8BZT2 Mir135a-1-201ENSMUST00000083473 90 ntBASIC6.99□□□□□ -1.29
Sh3rf2Q8BZT2 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Sh3rf2Q8BZT2 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Sh3rf2Q8BZT2 Olfr115-203ENSMUST00000223366 2273 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Sh3rf2Q8BZT2 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC6.99□□□□□ -1.29
Sh3rf2Q8BZT2 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC6.99□□□□□ -1.29
Sh3rf2Q8BZT2 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
Sh3rf2Q8BZT2 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Sh3rf2Q8BZT2 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Sh3rf2Q8BZT2 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Sh3rf2Q8BZT2 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Sh3rf2Q8BZT2 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Sh3rf2Q8BZT2 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Sh3rf2Q8BZT2 Gm29670-201ENSMUST00000190228 2491 ntBASIC6.99□□□□□ -1.29
Sh3rf2Q8BZT2 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
Sh3rf2Q8BZT2 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 CT009757.4-201ENSMUST00000221520 2541 ntBASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 Gm37420-201ENSMUST00000195332 2912 ntBASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 Gm43606-201ENSMUST00000195938 3556 ntBASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 Gm42577-201ENSMUST00000201367 3211 ntBASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 Gm12467-201ENSMUST00000117625 745 ntBASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 Gm12242-201ENSMUST00000118824 738 ntBASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 Gm13462-201ENSMUST00000121472 961 ntBASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 Gm21392-201ENSMUST00000182950 972 ntBASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 Gm35323-201ENSMUST00000191836 499 ntBASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 Gm9504-201ENSMUST00000196322 468 ntBASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 Gm19175-201ENSMUST00000199895 916 ntBASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 Gm43235-201ENSMUST00000200121 297 ntBASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 Gm43459-201ENSMUST00000202093 331 ntBASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 Gm45071-201ENSMUST00000205353 571 ntBASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 AC122533.1-201ENSMUST00000225177 767 ntBASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 AC152394.1-201ENSMUST00000227360 1086 ntBASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 Mir196a-1-201ENSMUST00000083612 102 ntBASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 Gm14615-201ENSMUST00000117575 1816 ntBASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 Gm37548-201ENSMUST00000194519 3814 ntBASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 Olfr466-202ENSMUST00000214214 4192 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Sh3rf2Q8BZT2 Kcna2-203ENSMUST00000197470 4370 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Sh3rf2Q8BZT2 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Sh3rf2Q8BZT2 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Sh3rf2Q8BZT2 AC111010.1-203ENSMUST00000227287 1548 ntBASIC6.97□□□□□ -1.29
Sh3rf2Q8BZT2 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Sh3rf2Q8BZT2 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Sh3rf2Q8BZT2 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Sh3rf2Q8BZT2 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Sh3rf2Q8BZT2 Gm13006-201ENSMUST00000118683 214 ntBASIC6.97□□□□□ -1.29
Sh3rf2Q8BZT2 Gm11445-201ENSMUST00000119101 532 ntBASIC6.97□□□□□ -1.29
Sh3rf2Q8BZT2 Gm12754-201ENSMUST00000121908 454 ntBASIC6.97□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms