Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Ppargc1a-205ENSMUST00000196968 2754 ntTSL 5 BASIC9.54□□□□□ -0.88
Usp47Q8BY87 Heatr5a-201ENSMUST00000040583 7763 ntAPPRIS P2 TSL 5 BASIC9.54□□□□□ -0.88
Usp47Q8BY87 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Usp47Q8BY87 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Usp47Q8BY87 Gm44620-201ENSMUST00000209183 2887 ntBASIC9.54□□□□□ -0.88
Usp47Q8BY87 Gm4894-202ENSMUST00000216428 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Usp47Q8BY87 Sim1-201ENSMUST00000020071 7355 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Usp47Q8BY87 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Usp47Q8BY87 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC9.53□□□□□ -0.88
Usp47Q8BY87 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Usp47Q8BY87 Rnu11-201ENSMUST00000104135 134 ntBASIC9.53□□□□□ -0.88
Usp47Q8BY87 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC9.53□□□□□ -0.88
Usp47Q8BY87 Gm12439-201ENSMUST00000117162 365 ntBASIC9.53□□□□□ -0.88
Usp47Q8BY87 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC9.53□□□□□ -0.88
Usp47Q8BY87 Gm8722-201ENSMUST00000121466 769 ntBASIC9.53□□□□□ -0.88
Usp47Q8BY87 Gm14038-201ENSMUST00000121500 807 ntBASIC9.53□□□□□ -0.88
Usp47Q8BY87 Gm14747-201ENSMUST00000149888 984 ntBASIC9.53□□□□□ -0.88
Usp47Q8BY87 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Usp47Q8BY87 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC9.53□□□□□ -0.88
Usp47Q8BY87 Mir7082-201ENSMUST00000183526 92 ntBASIC9.53□□□□□ -0.88
Usp47Q8BY87 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC9.53□□□□□ -0.88
Usp47Q8BY87 Gm43048-201ENSMUST00000196101 388 ntBASIC9.53□□□□□ -0.88
Usp47Q8BY87 Gm43160-201ENSMUST00000196453 421 ntBASIC9.53□□□□□ -0.88
Usp47Q8BY87 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC9.53□□□□□ -0.88
Usp47Q8BY87 Gm44374-201ENSMUST00000199821 140 ntBASIC9.53□□□□□ -0.88
Usp47Q8BY87 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Usp47Q8BY87 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Usp47Q8BY87 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Usp47Q8BY87 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Usp47Q8BY87 Gm22581-201ENSMUST00000083735 136 ntBASIC9.53□□□□□ -0.88
Usp47Q8BY87 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Usp47Q8BY87 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Usp47Q8BY87 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Usp47Q8BY87 Gm43880-201ENSMUST00000203635 2162 ntBASIC9.53□□□□□ -0.88
Usp47Q8BY87 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC9.53□□□□□ -0.88
Usp47Q8BY87 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Usp47Q8BY87 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Usp47Q8BY87 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Usp47Q8BY87 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.88
Usp47Q8BY87 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC9.52□□□□□ -0.88
Usp47Q8BY87 Gm26340-201ENSMUST00000102365 99 ntBASIC9.52□□□□□ -0.88
Usp47Q8BY87 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC9.52□□□□□ -0.88
Usp47Q8BY87 Gm15596-201ENSMUST00000121139 784 ntBASIC9.52□□□□□ -0.88
Usp47Q8BY87 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Usp47Q8BY87 Gm23031-201ENSMUST00000157998 119 ntBASIC9.52□□□□□ -0.88
Usp47Q8BY87 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Usp47Q8BY87 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC9.52□□□□□ -0.88
Usp47Q8BY87 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Usp47Q8BY87 Gm5324-201ENSMUST00000208115 476 ntBASIC9.52□□□□□ -0.88
Usp47Q8BY87 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC9.52□□□□□ -0.88
Usp47Q8BY87 AC124601.1-201ENSMUST00000220531 135 ntBASIC9.52□□□□□ -0.88
Usp47Q8BY87 AC122327.2-201ENSMUST00000220883 120 ntBASIC9.52□□□□□ -0.88
Usp47Q8BY87 AC122327.3-201ENSMUST00000221852 120 ntBASIC9.52□□□□□ -0.88
Usp47Q8BY87 AC166341.1-201ENSMUST00000223360 105 ntBASIC9.52□□□□□ -0.88
Usp47Q8BY87 AC164295.1-201ENSMUST00000224861 186 ntBASIC9.52□□□□□ -0.88
Usp47Q8BY87 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC9.52□□□□□ -0.88
Usp47Q8BY87 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC9.52□□□□□ -0.88
Usp47Q8BY87 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC9.52□□□□□ -0.88
Usp47Q8BY87 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Usp47Q8BY87 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC9.52□□□□□ -0.89
Usp47Q8BY87 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Usp47Q8BY87 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Usp47Q8BY87 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC9.52□□□□□ -0.89
Usp47Q8BY87 Gm42763-201ENSMUST00000199595 2087 ntBASIC9.52□□□□□ -0.89
Usp47Q8BY87 Gm37169-201ENSMUST00000195599 4161 ntBASIC9.52□□□□□ -0.89
Usp47Q8BY87 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Usp47Q8BY87 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC9.52□□□□□ -0.89
Usp47Q8BY87 R3hdm2-202ENSMUST00000077046 4029 ntAPPRIS P2 TSL 5 BASIC9.52□□□□□ -0.89
Usp47Q8BY87 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Usp47Q8BY87 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Usp47Q8BY87 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Usp47Q8BY87 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Usp47Q8BY87 Gm21846-201ENSMUST00000179257 3073 ntBASIC9.52□□□□□ -0.89
Usp47Q8BY87 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Usp47Q8BY87 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Usp47Q8BY87 Adgrl4-201ENSMUST00000046977 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Usp47Q8BY87 Gm37364-201ENSMUST00000192533 3920 ntBASIC9.52□□□□□ -0.89
Usp47Q8BY87 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Usp47Q8BY87 Ogfod1-201ENSMUST00000060632 5214 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Usp47Q8BY87 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Usp47Q8BY87 Gm22267-201ENSMUST00000104008 131 ntBASIC9.51□□□□□ -0.89
Usp47Q8BY87 Gm14550-201ENSMUST00000117918 407 ntBASIC9.51□□□□□ -0.89
Usp47Q8BY87 Gm14870-201ENSMUST00000118414 156 ntBASIC9.51□□□□□ -0.89
Usp47Q8BY87 Gm14614-201ENSMUST00000119873 384 ntBASIC9.51□□□□□ -0.89
Usp47Q8BY87 Gm12229-201ENSMUST00000120487 468 ntBASIC9.51□□□□□ -0.89
Usp47Q8BY87 Gm12181-201ENSMUST00000121448 531 ntBASIC9.51□□□□□ -0.89
Usp47Q8BY87 Gm11609-201ENSMUST00000121926 793 ntBASIC9.51□□□□□ -0.89
Usp47Q8BY87 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Usp47Q8BY87 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Usp47Q8BY87 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC9.51□□□□□ -0.89
Usp47Q8BY87 Gm20454-201ENSMUST00000172713 221 ntBASIC9.51□□□□□ -0.89
Usp47Q8BY87 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC9.51□□□□□ -0.89
Usp47Q8BY87 Gm21877-201ENSMUST00000185640 694 ntBASIC9.51□□□□□ -0.89
Usp47Q8BY87 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Usp47Q8BY87 Ighv1-83-201ENSMUST00000199643 351 ntBASIC9.51□□□□□ -0.89
Usp47Q8BY87 Gm44162-201ENSMUST00000203543 544 ntBASIC9.51□□□□□ -0.89
Usp47Q8BY87 Gm19324-201ENSMUST00000213229 1169 ntBASIC9.51□□□□□ -0.89
Usp47Q8BY87 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Usp47Q8BY87 A1cf-203ENSMUST00000224400 1204 ntBASIC9.51□□□□□ -0.89
Usp47Q8BY87 AC140288.1-201ENSMUST00000226329 503 ntBASIC9.51□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms