Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Foxc1Q61572 Gm40309-201ENSMUST00000202699 1752 ntBASIC6.39□□□□□ -1.39
Foxc1Q61572 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Foxc1Q61572 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Foxc1Q61572 Cldn18-201ENSMUST00000035048 4172 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Foxc1Q61572 3632451O06Rik-202ENSMUST00000118129 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Foxc1Q61572 Gm43414-201ENSMUST00000197710 3188 ntBASIC6.39□□□□□ -1.39
Foxc1Q61572 Saxo2-205ENSMUST00000207693 1927 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Foxc1Q61572 EPPK1-201ENSMUST00000226781 12325 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Foxc1Q61572 Tbc1d14-215ENSMUST00000146430 4582 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Foxc1Q61572 Tbc1d14-201ENSMUST00000031094 4590 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Foxc1Q61572 Lepr-202ENSMUST00000102777 3410 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Foxc1Q61572 Olfr517-202ENSMUST00000216500 2139 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Foxc1Q61572 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Foxc1Q61572 Tmem174-201ENSMUST00000050389 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Foxc1Q61572 Olfr1506-201ENSMUST00000213994 2495 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
Foxc1Q61572 Zbtb44-206ENSMUST00000217092 2472 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Foxc1Q61572 Vmn1r181-202ENSMUST00000226843 4496 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Foxc1Q61572 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Foxc1Q61572 4930402H05Rik-201ENSMUST00000203115 2829 ntBASIC6.38□□□□□ -1.39
Foxc1Q61572 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Foxc1Q61572 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Foxc1Q61572 n-R5s165-201ENSMUST00000104074 100 ntBASIC6.38□□□□□ -1.39
Foxc1Q61572 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Foxc1Q61572 Apod-202ENSMUST00000115230 1070 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Foxc1Q61572 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
Foxc1Q61572 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC6.38□□□□□ -1.39
Foxc1Q61572 Gm12220-201ENSMUST00000118476 172 ntBASIC6.38□□□□□ -1.39
Foxc1Q61572 Gm11399-201ENSMUST00000131021 324 ntTSL 5 BASIC6.38□□□□□ -1.39
Foxc1Q61572 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC6.38□□□□□ -1.39
Foxc1Q61572 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC6.38□□□□□ -1.39
Foxc1Q61572 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC6.38□□□□□ -1.39
Foxc1Q61572 Gm23833-201ENSMUST00000158900 252 ntBASIC6.38□□□□□ -1.39
Foxc1Q61572 Gm16556-201ENSMUST00000162608 471 ntTSL 5 BASIC6.38□□□□□ -1.39
Foxc1Q61572 Gm17047-201ENSMUST00000167709 430 ntBASIC6.38□□□□□ -1.39
Foxc1Q61572 5730435O14Rik-202ENSMUST00000170047 617 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Foxc1Q61572 Gm20453-201ENSMUST00000173968 226 ntBASIC6.38□□□□□ -1.39
Foxc1Q61572 Gm25301-201ENSMUST00000175285 113 ntBASIC6.38□□□□□ -1.39
Foxc1Q61572 Gm19932-201ENSMUST00000177033 313 ntBASIC6.38□□□□□ -1.39
Foxc1Q61572 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Foxc1Q61572 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Foxc1Q61572 Gm9169-201ENSMUST00000182930 536 ntBASIC6.38□□□□□ -1.39
Foxc1Q61572 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC6.38□□□□□ -1.39
Foxc1Q61572 Il19-204ENSMUST00000187916 720 ntTSL 2 BASIC6.38□□□□□ -1.39
Foxc1Q61572 Gm28788-201ENSMUST00000189717 375 ntBASIC6.38□□□□□ -1.39
Foxc1Q61572 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Foxc1Q61572 Gm29558-201ENSMUST00000190134 375 ntBASIC6.38□□□□□ -1.39
Foxc1Q61572 1700065J18Rik-202ENSMUST00000190576 387 ntTSL 3 BASIC6.38□□□□□ -1.39
Foxc1Q61572 Gm28588-201ENSMUST00000191581 796 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Foxc1Q61572 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC6.38□□□□□ -1.39
Foxc1Q61572 Gm7442-201ENSMUST00000197778 383 ntBASIC6.38□□□□□ -1.39
Foxc1Q61572 Ighv1-79-201ENSMUST00000200152 350 ntBASIC6.38□□□□□ -1.39
Foxc1Q61572 Gm4754-201ENSMUST00000201337 809 ntBASIC6.38□□□□□ -1.39
Foxc1Q61572 Nsg1-205ENSMUST00000201415 883 ntTSL 5 BASIC6.38□□□□□ -1.39
Foxc1Q61572 Gm44790-201ENSMUST00000204137 798 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
Foxc1Q61572 Gm7751-201ENSMUST00000212868 709 ntBASIC6.38□□□□□ -1.39
Foxc1Q61572 Gm46197-201ENSMUST00000217530 416 ntBASIC6.38□□□□□ -1.39
Foxc1Q61572 AC113107.1-201ENSMUST00000218358 396 ntTSL 3 BASIC6.38□□□□□ -1.39
Foxc1Q61572 Gm19441-201ENSMUST00000221545 330 ntBASIC6.38□□□□□ -1.39
Foxc1Q61572 AC122354.1-201ENSMUST00000222328 702 ntTSL 5 BASIC6.38□□□□□ -1.39
Foxc1Q61572 AC113031.5-201ENSMUST00000227116 606 ntBASIC6.38□□□□□ -1.39
Foxc1Q61572 CT030704.1-201ENSMUST00000227521 699 ntBASIC6.38□□□□□ -1.39
Foxc1Q61572 AC113178.1-201ENSMUST00000227616 935 ntBASIC6.38□□□□□ -1.39
Foxc1Q61572 AC107453.3-201ENSMUST00000228205 639 ntBASIC6.38□□□□□ -1.39
Foxc1Q61572 1700012A03Rik-201ENSMUST00000031778 918 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Foxc1Q61572 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC6.38□□□□□ -1.39
Foxc1Q61572 Cldn10-202ENSMUST00000071546 1031 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Foxc1Q61572 Tonsl-201ENSMUST00000078803 885 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Foxc1Q61572 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Foxc1Q61572 Gm826-201ENSMUST00000099127 637 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Foxc1Q61572 Perm1-201ENSMUST00000105572 3901 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Foxc1Q61572 Map4k4-209ENSMUST00000192509 3918 ntAPPRIS P3 TSL 2 BASIC6.38□□□□□ -1.39
Foxc1Q61572 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Foxc1Q61572 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Foxc1Q61572 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Foxc1Q61572 Lrrc23-201ENSMUST00000032218 1470 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Foxc1Q61572 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Foxc1Q61572 AC107232.1-201ENSMUST00000227785 1503 ntBASIC6.38□□□□□ -1.39
Foxc1Q61572 CT025675.1-201ENSMUST00000228171 1567 ntBASIC6.38□□□□□ -1.39
Foxc1Q61572 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC6.38□□□□□ -1.39
Foxc1Q61572 Asph-206ENSMUST00000103004 1762 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Foxc1Q61572 Gm8366-201ENSMUST00000118751 1769 ntBASIC6.38□□□□□ -1.39
Foxc1Q61572 Gm8346-201ENSMUST00000178968 1769 ntBASIC6.38□□□□□ -1.39
Foxc1Q61572 AC154862.1-201ENSMUST00000225060 1763 ntBASIC6.38□□□□□ -1.39
Foxc1Q61572 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC6.38□□□□□ -1.39
Foxc1Q61572 Gm26521-201ENSMUST00000181576 2215 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Foxc1Q61572 Olfr521-202ENSMUST00000219663 2277 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Foxc1Q61572 Olfr521-203ENSMUST00000220001 2254 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Foxc1Q61572 Gm31182-201ENSMUST00000219061 2391 ntTSL 5 BASIC6.38□□□□□ -1.39
Foxc1Q61572 4932438H23Rik-202ENSMUST00000114076 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Foxc1Q61572 Ptpro-207ENSMUST00000203914 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Foxc1Q61572 Hnrnpk-224ENSMUST00000224182 2754 ntBASIC6.38□□□□□ -1.39
Foxc1Q61572 Bbs9-211ENSMUST00000150395 3425 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Foxc1Q61572 Ccdc15-201ENSMUST00000037275 3525 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Foxc1Q61572 Gpr83-201ENSMUST00000034408 3586 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Foxc1Q61572 Med23-201ENSMUST00000020159 4798 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Foxc1Q61572 Tdrd1-201ENSMUST00000078723 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Foxc1Q61572 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Foxc1Q61572 Ltn1-201ENSMUST00000039449 7737 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Foxc1Q61572 Ppfia2-203ENSMUST00000217854 8885 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms