Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC7.94□□□□□ -1.14
Hmgb1P63158 CT009556.3-201ENSMUST00000226173 513 ntBASIC7.94□□□□□ -1.14
Hmgb1P63158 AC158981.1-201ENSMUST00000226943 1205 ntBASIC7.94□□□□□ -1.14
Hmgb1P63158 Ifitm5-201ENSMUST00000026562 765 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb1P63158 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb1P63158 Gm5815-201ENSMUST00000050706 1185 ntBASIC7.94□□□□□ -1.14
Hmgb1P63158 Olfr1494-201ENSMUST00000051768 948 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Hmgb1P63158 Gm9800-201ENSMUST00000052615 336 ntBASIC7.94□□□□□ -1.14
Hmgb1P63158 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Hmgb1P63158 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb1P63158 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Hmgb1P63158 Gm24924-201ENSMUST00000084007 164 ntBASIC7.94□□□□□ -1.14
Hmgb1P63158 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb1P63158 Larp1b-204ENSMUST00000099121 1030 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb1P63158 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Hmgb1P63158 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb1P63158 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb1P63158 Gm38120-201ENSMUST00000195506 4642 ntBASIC7.94□□□□□ -1.14
Hmgb1P63158 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Hmgb1P63158 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb1P63158 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb1P63158 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb1P63158 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC7.94□□□□□ -1.14
Hmgb1P63158 Gm38070-201ENSMUST00000191850 6480 ntBASIC7.94□□□□□ -1.14
Hmgb1P63158 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb1P63158 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb1P63158 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
Hmgb1P63158 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Hmgb1P63158 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Hmgb1P63158 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb1P63158 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Hmgb1P63158 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb1P63158 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb1P63158 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC7.94□□□□□ -1.14
Hmgb1P63158 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb1P63158 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb1P63158 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb1P63158 Gm20342-201ENSMUST00000185480 9720 ntBASIC7.93□□□□□ -1.14
Hmgb1P63158 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
Hmgb1P63158 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb1P63158 Homer1-210ENSMUST00000109497 779 ntTSL 5 BASIC7.93□□□□□ -1.14
Hmgb1P63158 Homer1-211ENSMUST00000109498 815 ntTSL 5 BASIC7.93□□□□□ -1.14
Hmgb1P63158 Gm11320-201ENSMUST00000119434 463 ntBASIC7.93□□□□□ -1.14
Hmgb1P63158 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb1P63158 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb1P63158 Gm15417-201ENSMUST00000126926 925 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb1P63158 Gm11646-201ENSMUST00000135857 397 ntTSL 3 BASIC7.93□□□□□ -1.14
Hmgb1P63158 E130215H24Rik-201ENSMUST00000145525 939 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb1P63158 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC7.93□□□□□ -1.14
Hmgb1P63158 Gm22882-201ENSMUST00000157749 124 ntBASIC7.93□□□□□ -1.14
Hmgb1P63158 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC7.93□□□□□ -1.14
Hmgb1P63158 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Hmgb1P63158 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Hmgb1P63158 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC7.93□□□□□ -1.14
Hmgb1P63158 Gm37871-201ENSMUST00000194973 688 ntBASIC7.93□□□□□ -1.14
Hmgb1P63158 AC160635.1-201ENSMUST00000216731 474 ntBASIC7.93□□□□□ -1.14
Hmgb1P63158 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC7.93□□□□□ -1.14
Hmgb1P63158 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC7.93□□□□□ -1.14
Hmgb1P63158 AC154573.2-201ENSMUST00000224174 378 ntBASIC7.93□□□□□ -1.14
Hmgb1P63158 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Hmgb1P63158 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC7.93□□□□□ -1.14
Hmgb1P63158 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC7.93□□□□□ -1.14
Hmgb1P63158 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb1P63158 Gm37653-201ENSMUST00000195401 3578 ntBASIC7.93□□□□□ -1.14
Hmgb1P63158 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Hmgb1P63158 Gm11290-204ENSMUST00000224688 3042 ntBASIC7.93□□□□□ -1.14
Hmgb1P63158 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
Hmgb1P63158 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Hmgb1P63158 Gm28667-201ENSMUST00000189873 2171 ntBASIC7.93□□□□□ -1.14
Hmgb1P63158 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb1P63158 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Hmgb1P63158 Tctex1d1-202ENSMUST00000116317 1772 ntAPPRIS P3 TSL 5 BASIC7.92□□□□□ -1.14
Hmgb1P63158 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Hmgb1P63158 Cd200r4-203ENSMUST00000176819 1796 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Hmgb1P63158 Gm38372-201ENSMUST00000194854 4028 ntBASIC7.92□□□□□ -1.14
Hmgb1P63158 Gm28112-201ENSMUST00000190898 1875 ntBASIC7.92□□□□□ -1.14
Hmgb1P63158 Gm37530-201ENSMUST00000191759 4932 ntBASIC7.92□□□□□ -1.14
Hmgb1P63158 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Hmgb1P63158 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
Hmgb1P63158 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Hmgb1P63158 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Hmgb1P63158 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Hmgb1P63158 Gm25276-201ENSMUST00000104300 124 ntBASIC7.92□□□□□ -1.14
Hmgb1P63158 Gm15040-201ENSMUST00000118561 1241 ntBASIC7.92□□□□□ -1.14
Hmgb1P63158 Gm15665-201ENSMUST00000119116 847 ntBASIC7.92□□□□□ -1.14
Hmgb1P63158 Gm13038-201ENSMUST00000119886 459 ntBASIC7.92□□□□□ -1.14
Hmgb1P63158 Gm13118-201ENSMUST00000120402 549 ntBASIC7.92□□□□□ -1.14
Hmgb1P63158 Gm15049-201ENSMUST00000120474 463 ntBASIC7.92□□□□□ -1.14
Hmgb1P63158 Gm14229-201ENSMUST00000121178 850 ntBASIC7.92□□□□□ -1.14
Hmgb1P63158 Gm15006-201ENSMUST00000121419 1122 ntBASIC7.92□□□□□ -1.14
Hmgb1P63158 Gm24139-201ENSMUST00000122780 288 ntBASIC7.92□□□□□ -1.14
Hmgb1P63158 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Hmgb1P63158 Gm13017-201ENSMUST00000156409 400 ntTSL 3 BASIC7.92□□□□□ -1.14
Hmgb1P63158 Gm26407-201ENSMUST00000158504 307 ntBASIC7.92□□□□□ -1.14
Hmgb1P63158 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC7.92□□□□□ -1.14
Hmgb1P63158 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC7.92□□□□□ -1.14
Hmgb1P63158 Gm20797-201ENSMUST00000177894 383 ntBASIC7.92□□□□□ -1.14
Hmgb1P63158 Gm7426-201ENSMUST00000179046 404 ntBASIC7.92□□□□□ -1.14
Hmgb1P63158 Gm5272-201ENSMUST00000182730 982 ntBASIC7.92□□□□□ -1.14
Hmgb1P63158 1700066B17Rik-202ENSMUST00000187091 675 ntTSL 3 BASIC7.92□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 121.3 ms