Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Map1b-201ENSMUST00000064762 11808 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sf3b6P59708 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sf3b6P59708 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC6.72□□□□□ -1.33
Sf3b6P59708 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sf3b6P59708 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sf3b6P59708 Gm42973-201ENSMUST00000197913 3200 ntBASIC6.72□□□□□ -1.33
Sf3b6P59708 Etnppl-202ENSMUST00000163620 1482 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Sf3b6P59708 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Sf3b6P59708 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sf3b6P59708 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sf3b6P59708 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
Sf3b6P59708 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
Sf3b6P59708 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
Sf3b6P59708 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Sf3b6P59708 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Sf3b6P59708 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Sf3b6P59708 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.33
Sf3b6P59708 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
Sf3b6P59708 Cyp2c53-ps-202ENSMUST00000175960 1370 ntBASIC6.71□□□□□ -1.33
Sf3b6P59708 Fv1-201ENSMUST00000094481 1380 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
Sf3b6P59708 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Sf3b6P59708 Pogz-201ENSMUST00000042402 4775 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
Sf3b6P59708 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC6.71□□□□□ -1.33
Sf3b6P59708 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC6.71□□□□□ -1.33
Sf3b6P59708 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
Sf3b6P59708 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Sf3b6P59708 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Sf3b6P59708 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Sf3b6P59708 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC6.71□□□□□ -1.33
Sf3b6P59708 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Sf3b6P59708 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Sf3b6P59708 Tbx20-201ENSMUST00000052946 9091 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
Sf3b6P59708 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Sf3b6P59708 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Sf3b6P59708 AC153881.3-201ENSMUST00000218494 1561 ntBASIC6.71□□□□□ -1.34
Sf3b6P59708 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.34
Sf3b6P59708 Gm26561-201ENSMUST00000180743 1413 ntTSL 5 BASIC6.71□□□□□ -1.34
Sf3b6P59708 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Sf3b6P59708 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Sf3b6P59708 Igkv8-27-201ENSMUST00000103381 300 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Sf3b6P59708 Gm22661-201ENSMUST00000104192 132 ntBASIC6.71□□□□□ -1.34
Sf3b6P59708 Gm22150-201ENSMUST00000104447 135 ntBASIC6.71□□□□□ -1.34
Sf3b6P59708 Cep112-204ENSMUST00000106724 678 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Sf3b6P59708 Wfdc2-202ENSMUST00000109344 429 ntTSL 3 BASIC6.71□□□□□ -1.34
Sf3b6P59708 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC6.71□□□□□ -1.34
Sf3b6P59708 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC6.71□□□□□ -1.34
Sf3b6P59708 Gm12883-201ENSMUST00000117867 364 ntBASIC6.71□□□□□ -1.34
Sf3b6P59708 Gm13739-201ENSMUST00000118020 530 ntBASIC6.71□□□□□ -1.34
Sf3b6P59708 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Sf3b6P59708 Gm14800-201ENSMUST00000122084 1272 ntBASIC6.71□□□□□ -1.34
Sf3b6P59708 Gm14380-201ENSMUST00000122298 431 ntBASIC6.71□□□□□ -1.34
Sf3b6P59708 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC6.71□□□□□ -1.34
Sf3b6P59708 Gm22949-201ENSMUST00000158562 105 ntBASIC6.71□□□□□ -1.34
Sf3b6P59708 Gm17194-201ENSMUST00000164610 348 ntBASIC6.71□□□□□ -1.34
Sf3b6P59708 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Sf3b6P59708 1700071M16Rik-202ENSMUST00000167672 767 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Sf3b6P59708 Adgrg4-206ENSMUST00000168724 531 ntBASIC6.71□□□□□ -1.34
Sf3b6P59708 Olfr457-201ENSMUST00000170504 1039 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Sf3b6P59708 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC6.71□□□□□ -1.34
Sf3b6P59708 9330179D12Rik-202ENSMUST00000180811 1001 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Sf3b6P59708 Gm26977-201ENSMUST00000183151 996 ntBASIC6.71□□□□□ -1.34
Sf3b6P59708 Gm8870-201ENSMUST00000188170 775 ntBASIC6.71□□□□□ -1.34
Sf3b6P59708 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC6.71□□□□□ -1.34
Sf3b6P59708 Tdpoz2-201ENSMUST00000191960 1145 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Sf3b6P59708 Gm17967-201ENSMUST00000195319 647 ntBASIC6.71□□□□□ -1.34
Sf3b6P59708 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Sf3b6P59708 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC6.71□□□□□ -1.34
Sf3b6P59708 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
Sf3b6P59708 Tmem147-206ENSMUST00000208169 537 ntTSL 5 BASIC6.71□□□□□ -1.34
Sf3b6P59708 Gm34418-201ENSMUST00000212879 309 ntTSL 5 BASIC6.71□□□□□ -1.34
Sf3b6P59708 Gm35501-201ENSMUST00000213492 783 ntTSL 2 BASIC6.71□□□□□ -1.34
Sf3b6P59708 Gm7557-201ENSMUST00000221935 865 ntBASIC6.71□□□□□ -1.34
Sf3b6P59708 AC154806.5-205ENSMUST00000228828 411 ntBASIC6.71□□□□□ -1.34
Sf3b6P59708 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Sf3b6P59708 Cox8c-201ENSMUST00000053611 458 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Sf3b6P59708 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Sf3b6P59708 Gm24917-201ENSMUST00000083935 104 ntBASIC6.71□□□□□ -1.34
Sf3b6P59708 Gm22865-201ENSMUST00000083949 214 ntBASIC6.71□□□□□ -1.34
Sf3b6P59708 Vmn1r42-201ENSMUST00000089419 1098 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Sf3b6P59708 Mir484-201ENSMUST00000093566 67 ntBASIC6.71□□□□□ -1.34
Sf3b6P59708 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Sf3b6P59708 Frmpd4-201ENSMUST00000112145 7924 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
Sf3b6P59708 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Sf3b6P59708 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC6.71□□□□□ -1.34
Sf3b6P59708 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Sf3b6P59708 Gm18957-201ENSMUST00000197623 1813 ntBASIC6.71□□□□□ -1.34
Sf3b6P59708 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Sf3b6P59708 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Sf3b6P59708 Gm43279-201ENSMUST00000202376 2512 ntBASIC6.71□□□□□ -1.34
Sf3b6P59708 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC6.71□□□□□ -1.34
Sf3b6P59708 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Sf3b6P59708 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Sf3b6P59708 AC156636.1-201ENSMUST00000218639 2229 ntBASIC6.7□□□□□ -1.34
Sf3b6P59708 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
Sf3b6P59708 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
Sf3b6P59708 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Sf3b6P59708 Gm21036-201ENSMUST00000207544 2611 ntBASIC6.7□□□□□ -1.34
Sf3b6P59708 AC158988.1-201ENSMUST00000226731 2624 ntBASIC6.7□□□□□ -1.34
Sf3b6P59708 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Sf3b6P59708 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms