Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh11P55288 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh11P55288 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh11P55288 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh11P55288 Gm37914-201ENSMUST00000195317 2679 ntBASIC6.23□□□□□ -1.41
Cdh11P55288 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC6.23□□□□□ -1.41
Cdh11P55288 Gm20775-201ENSMUST00000100115 1851 ntBASIC6.23□□□□□ -1.41
Cdh11P55288 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Cdh11P55288 Gm5512-202ENSMUST00000220222 1522 ntBASIC6.23□□□□□ -1.41
Cdh11P55288 AC154642.2-201ENSMUST00000223657 2485 ntBASIC6.23□□□□□ -1.41
Cdh11P55288 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh11P55288 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Cdh11P55288 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh11P55288 Gm18310-201ENSMUST00000206494 3912 ntBASIC6.23□□□□□ -1.41
Cdh11P55288 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh11P55288 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh11P55288 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC6.23□□□□□ -1.41
Cdh11P55288 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh11P55288 AC107452.3-201ENSMUST00000228807 1308 ntBASIC6.23□□□□□ -1.41
Cdh11P55288 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh11P55288 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdh11P55288 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdh11P55288 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Cdh11P55288 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
Cdh11P55288 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdh11P55288 Gm6679-201ENSMUST00000191467 1869 ntBASIC6.22□□□□□ -1.41
Cdh11P55288 Gm38200-201ENSMUST00000192083 2111 ntBASIC6.22□□□□□ -1.41
Cdh11P55288 Gm37953-201ENSMUST00000195293 1884 ntBASIC6.22□□□□□ -1.41
Cdh11P55288 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Cdh11P55288 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Cdh11P55288 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Cdh11P55288 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Cdh11P55288 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Cdh11P55288 Gm24541-201ENSMUST00000103871 96 ntBASIC6.22□□□□□ -1.41
Cdh11P55288 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC6.22□□□□□ -1.41
Cdh11P55288 Gm11987-201ENSMUST00000118524 381 ntBASIC6.22□□□□□ -1.41
Cdh11P55288 Gm13930-201ENSMUST00000118569 368 ntBASIC6.22□□□□□ -1.41
Cdh11P55288 Gm13940-201ENSMUST00000121023 301 ntBASIC6.22□□□□□ -1.41
Cdh11P55288 Gm14787-201ENSMUST00000121236 388 ntBASIC6.22□□□□□ -1.41
Cdh11P55288 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC6.22□□□□□ -1.41
Cdh11P55288 Gm10913-201ENSMUST00000133732 463 ntBASIC6.22□□□□□ -1.41
Cdh11P55288 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC6.22□□□□□ -1.41
Cdh11P55288 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC6.22□□□□□ -1.41
Cdh11P55288 Gm37017-201ENSMUST00000195266 747 ntBASIC6.22□□□□□ -1.41
Cdh11P55288 Gm7972-201ENSMUST00000208434 1137 ntBASIC6.22□□□□□ -1.41
Cdh11P55288 Gm45100-201ENSMUST00000209153 391 ntBASIC6.22□□□□□ -1.41
Cdh11P55288 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Cdh11P55288 Gm8275-201ENSMUST00000219732 424 ntBASIC6.22□□□□□ -1.41
Cdh11P55288 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC6.22□□□□□ -1.41
Cdh11P55288 AC165106.1-201ENSMUST00000227580 408 ntBASIC6.22□□□□□ -1.41
Cdh11P55288 Kcne3-201ENSMUST00000049333 1012 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdh11P55288 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Cdh11P55288 Gm6887-201ENSMUST00000080945 482 ntBASIC6.22□□□□□ -1.41
Cdh11P55288 Gm6419-201ENSMUST00000097166 429 ntBASIC6.22□□□□□ -1.41
Cdh11P55288 Gm2108-201ENSMUST00000165058 2177 ntBASIC6.22□□□□□ -1.41
Cdh11P55288 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdh11P55288 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Cdh11P55288 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Cdh11P55288 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Cdh11P55288 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Cdh11P55288 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdh11P55288 Gm11342-203ENSMUST00000224879 1324 ntBASIC6.22□□□□□ -1.41
Cdh11P55288 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Cdh11P55288 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdh11P55288 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdh11P55288 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Cdh11P55288 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Cdh11P55288 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC6.21□□□□□ -1.41
Cdh11P55288 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Cdh11P55288 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC6.21□□□□□ -1.41
Cdh11P55288 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC6.21□□□□□ -1.41
Cdh11P55288 Gm43953-201ENSMUST00000203709 2867 ntBASIC6.21□□□□□ -1.41
Cdh11P55288 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Cdh11P55288 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC6.21□□□□□ -1.41
Cdh11P55288 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Cdh11P55288 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Cdh11P55288 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Cdh11P55288 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Cdh11P55288 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.42
Cdh11P55288 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdh11P55288 AC135119.1-204ENSMUST00000228036 2663 ntBASIC6.21□□□□□ -1.42
Cdh11P55288 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Cdh11P55288 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Cdh11P55288 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Cdh11P55288 Gm25344-201ENSMUST00000104503 132 ntBASIC6.21□□□□□ -1.42
Cdh11P55288 Gm13878-201ENSMUST00000117986 577 ntBASIC6.21□□□□□ -1.42
Cdh11P55288 Gm11338-201ENSMUST00000120086 1160 ntBASIC6.21□□□□□ -1.42
Cdh11P55288 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdh11P55288 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Cdh11P55288 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdh11P55288 Gm8305-201ENSMUST00000180022 1195 ntBASIC6.21□□□□□ -1.42
Cdh11P55288 Mir7084-201ENSMUST00000183876 70 ntBASIC6.21□□□□□ -1.42
Cdh11P55288 Mir378d-201ENSMUST00000184232 110 ntBASIC6.21□□□□□ -1.42
Cdh11P55288 Gm28665-201ENSMUST00000189269 670 ntBASIC6.21□□□□□ -1.42
Cdh11P55288 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC6.21□□□□□ -1.42
Cdh11P55288 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdh11P55288 Gm45725-201ENSMUST00000212962 337 ntBASIC6.21□□□□□ -1.42
Cdh11P55288 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Cdh11P55288 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC6.21□□□□□ -1.42
Cdh11P55288 AC124510.2-201ENSMUST00000221958 683 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms