Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm37604-201ENSMUST00000191749 1272 ntBASIC10.36□□□□□ -0.75
Cux1P53564 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC10.36□□□□□ -0.75
Cux1P53564 Gm44265-201ENSMUST00000203631 465 ntBASIC10.36□□□□□ -0.75
Cux1P53564 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cux1P53564 Gm3266-201ENSMUST00000217832 591 ntBASIC10.36□□□□□ -0.75
Cux1P53564 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cux1P53564 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cux1P53564 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cux1P53564 CT009757.6-201ENSMUST00000220661 2312 ntBASIC10.36□□□□□ -0.75
Cux1P53564 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cux1P53564 Tbc1d24-206ENSMUST00000168410 7683 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cux1P53564 Depdc5-205ENSMUST00000120902 5195 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Cux1P53564 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cux1P53564 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cux1P53564 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cux1P53564 Nhsl2-201ENSMUST00000101339 12971 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Cux1P53564 Gm17638-201ENSMUST00000181255 4343 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cux1P53564 Gm37647-201ENSMUST00000194556 3143 ntBASIC10.35□□□□□ -0.75
Cux1P53564 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cux1P53564 Gm43876-201ENSMUST00000203831 3229 ntBASIC10.35□□□□□ -0.75
Cux1P53564 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cux1P53564 Gm13265-201ENSMUST00000118090 421 ntBASIC10.35□□□□□ -0.75
Cux1P53564 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
Cux1P53564 Gm6004-201ENSMUST00000173237 1116 ntBASIC10.35□□□□□ -0.75
Cux1P53564 Gm23632-201ENSMUST00000175289 125 ntBASIC10.35□□□□□ -0.75
Cux1P53564 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Cux1P53564 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC10.35□□□□□ -0.75
Cux1P53564 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
Cux1P53564 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC10.35□□□□□ -0.75
Cux1P53564 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cux1P53564 AC112680.2-201ENSMUST00000213119 595 ntBASIC10.35□□□□□ -0.75
Cux1P53564 AV026068-216ENSMUST00000223874 328 ntBASIC10.35□□□□□ -0.75
Cux1P53564 AV026068-218ENSMUST00000223980 575 ntBASIC10.35□□□□□ -0.75
Cux1P53564 CT025598.1-201ENSMUST00000225140 427 ntBASIC10.35□□□□□ -0.75
Cux1P53564 Vmn1r41-205ENSMUST00000227630 827 ntBASIC10.35□□□□□ -0.75
Cux1P53564 AC154563.1-201ENSMUST00000228317 442 ntBASIC10.35□□□□□ -0.75
Cux1P53564 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cux1P53564 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cux1P53564 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cux1P53564 Fbxo7-204ENSMUST00000130320 5388 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cux1P53564 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cux1P53564 Olfr538-202ENSMUST00000210973 1920 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Cux1P53564 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cux1P53564 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cux1P53564 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC10.35□□□□□ -0.75
Cux1P53564 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cux1P53564 Acad11-201ENSMUST00000047799 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cux1P53564 Atf6-201ENSMUST00000027974 7246 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cux1P53564 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC10.35□□□□□ -0.75
Cux1P53564 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cux1P53564 Tcf4-207ENSMUST00000114985 8577 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cux1P53564 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC10.35□□□□□ -0.75
Cux1P53564 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cux1P53564 Olfr433-201ENSMUST00000052975 2406 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Cux1P53564 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Cux1P53564 Gm14529-201ENSMUST00000117894 406 ntBASIC10.34□□□□□ -0.75
Cux1P53564 Gm14805-201ENSMUST00000120172 340 ntBASIC10.34□□□□□ -0.75
Cux1P53564 Gm12229-201ENSMUST00000120487 468 ntBASIC10.34□□□□□ -0.75
Cux1P53564 Gm9428-201ENSMUST00000127214 769 ntBASIC10.34□□□□□ -0.75
Cux1P53564 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC10.34□□□□□ -0.75
Cux1P53564 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC10.34□□□□□ -0.75
Cux1P53564 Gm23276-201ENSMUST00000157913 138 ntBASIC10.34□□□□□ -0.75
Cux1P53564 Gm23343-201ENSMUST00000158964 143 ntBASIC10.34□□□□□ -0.75
Cux1P53564 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cux1P53564 Gm6693-201ENSMUST00000189583 813 ntBASIC10.34□□□□□ -0.75
Cux1P53564 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
Cux1P53564 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC10.34□□□□□ -0.75
Cux1P53564 Gm17824-201ENSMUST00000197690 805 ntBASIC10.34□□□□□ -0.75
Cux1P53564 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC10.34□□□□□ -0.75
Cux1P53564 AC158954.1-201ENSMUST00000228272 1006 ntBASIC10.34□□□□□ -0.75
Cux1P53564 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cux1P53564 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Cux1P53564 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cux1P53564 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Cux1P53564 Mpp7-201ENSMUST00000115869 4975 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Cux1P53564 Ank3-247ENSMUST00000218680 5500 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Cux1P53564 Sptan1-203ENSMUST00000100225 7892 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cux1P53564 Sptan1-202ENSMUST00000095083 7883 ntTSL 5 BASIC10.34□□□□□ -0.75
Cux1P53564 Mtif2-201ENSMUST00000020749 2425 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cux1P53564 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cux1P53564 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC10.34□□□□□ -0.75
Cux1P53564 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC10.34□□□□□ -0.75
Cux1P53564 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC10.34□□□□□ -0.75
Cux1P53564 Gm43176-201ENSMUST00000199653 2989 ntBASIC10.34□□□□□ -0.75
Cux1P53564 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cux1P53564 Ctnnd1-219ENSMUST00000111693 6255 ntAPPRIS ALT1 TSL 5 BASIC10.34□□□□□ -0.75
Cux1P53564 AC022775.1-201ENSMUST00000228163 2698 ntBASIC10.34□□□□□ -0.75
Cux1P53564 Mars2-201ENSMUST00000061334 11294 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Cux1P53564 Gm43873-201ENSMUST00000204505 3938 ntBASIC10.33□□□□□ -0.76
Cux1P53564 Gm26289-201ENSMUST00000104169 131 ntBASIC10.33□□□□□ -0.76
Cux1P53564 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Cux1P53564 Gm15257-201ENSMUST00000177680 883 ntBASIC10.33□□□□□ -0.76
Cux1P53564 Gm15252-201ENSMUST00000177750 883 ntBASIC10.33□□□□□ -0.76
Cux1P53564 Gm15256-201ENSMUST00000177793 883 ntBASIC10.33□□□□□ -0.76
Cux1P53564 Gm15260-201ENSMUST00000179402 883 ntBASIC10.33□□□□□ -0.76
Cux1P53564 Mir6367-201ENSMUST00000183385 102 ntBASIC10.33□□□□□ -0.76
Cux1P53564 Mir7211-201ENSMUST00000184071 63 ntBASIC10.33□□□□□ -0.76
Cux1P53564 Gm29197-201ENSMUST00000185922 702 ntBASIC10.33□□□□□ -0.76
Cux1P53564 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC10.33□□□□□ -0.76
Cux1P53564 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms