Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Cdx2P43241 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Cdx2P43241 Gm43410-201ENSMUST00000197510 2234 ntBASIC6.56□□□□□ -1.36
Cdx2P43241 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Cdx2P43241 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Cdx2P43241 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC6.55□□□□□ -1.36
Cdx2P43241 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Cdx2P43241 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Cdx2P43241 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Cdx2P43241 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdx2P43241 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdx2P43241 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Cdx2P43241 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC6.55□□□□□ -1.36
Cdx2P43241 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdx2P43241 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdx2P43241 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdx2P43241 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Cdx2P43241 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Cdx2P43241 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdx2P43241 AC159264.1-201ENSMUST00000224844 4257 ntBASIC6.55□□□□□ -1.36
Cdx2P43241 Mapk10-202ENSMUST00000112846 2617 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Cdx2P43241 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC6.55□□□□□ -1.36
Cdx2P43241 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC6.55□□□□□ -1.36
Cdx2P43241 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Cdx2P43241 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Cdx2P43241 Exoc2-202ENSMUST00000102946 4375 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdx2P43241 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdx2P43241 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdx2P43241 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Cdx2P43241 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Cdx2P43241 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Cdx2P43241 Gm14893-201ENSMUST00000117904 282 ntBASIC6.55□□□□□ -1.36
Cdx2P43241 Gm13313-201ENSMUST00000118938 1084 ntBASIC6.55□□□□□ -1.36
Cdx2P43241 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Cdx2P43241 Gm23674-201ENSMUST00000157473 131 ntBASIC6.55□□□□□ -1.36
Cdx2P43241 Gm25904-201ENSMUST00000158491 143 ntBASIC6.55□□□□□ -1.36
Cdx2P43241 Gm25675-201ENSMUST00000174979 118 ntBASIC6.55□□□□□ -1.36
Cdx2P43241 n-R5s209-201ENSMUST00000179494 119 ntBASIC6.55□□□□□ -1.36
Cdx2P43241 Gm26570-201ENSMUST00000180672 342 ntBASIC6.55□□□□□ -1.36
Cdx2P43241 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC6.55□□□□□ -1.36
Cdx2P43241 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC6.55□□□□□ -1.36
Cdx2P43241 Gm5694-201ENSMUST00000195648 641 ntBASIC6.55□□□□□ -1.36
Cdx2P43241 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Cdx2P43241 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC6.55□□□□□ -1.36
Cdx2P43241 Gm44571-201ENSMUST00000208092 533 ntBASIC6.55□□□□□ -1.36
Cdx2P43241 AL929555.1-201ENSMUST00000215283 509 ntBASIC6.55□□□□□ -1.36
Cdx2P43241 AC104906.1-201ENSMUST00000218122 913 ntBASIC6.55□□□□□ -1.36
Cdx2P43241 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC6.55□□□□□ -1.36
Cdx2P43241 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC6.55□□□□□ -1.36
Cdx2P43241 AC158750.1-201ENSMUST00000226163 634 ntBASIC6.55□□□□□ -1.36
Cdx2P43241 AC131029.2-201ENSMUST00000226696 628 ntBASIC6.55□□□□□ -1.36
Cdx2P43241 CT009556.1-201ENSMUST00000227282 449 ntBASIC6.55□□□□□ -1.36
Cdx2P43241 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdx2P43241 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdx2P43241 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Cdx2P43241 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdx2P43241 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdx2P43241 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdx2P43241 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdx2P43241 Olfr45-202ENSMUST00000214637 6157 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Cdx2P43241 Olfr381-204ENSMUST00000215358 2658 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Cdx2P43241 Gm44777-201ENSMUST00000205941 4052 ntBASIC6.55□□□□□ -1.36
Cdx2P43241 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC6.55□□□□□ -1.36
Cdx2P43241 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdx2P43241 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Cdx2P43241 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdx2P43241 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdx2P43241 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Cdx2P43241 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Cdx2P43241 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Cdx2P43241 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Cdx2P43241 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdx2P43241 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdx2P43241 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC6.54□□□□□ -1.36
Cdx2P43241 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Cdx2P43241 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC6.54□□□□□ -1.36
Cdx2P43241 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Cdx2P43241 Gm31049-201ENSMUST00000201516 1302 ntBASIC6.54□□□□□ -1.36
Cdx2P43241 AC139750.1-201ENSMUST00000223962 1300 ntBASIC6.54□□□□□ -1.36
Cdx2P43241 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Cdx2P43241 Gm43497-201ENSMUST00000201137 2316 ntBASIC6.54□□□□□ -1.36
Cdx2P43241 Gm43961-201ENSMUST00000203289 1872 ntBASIC6.54□□□□□ -1.36
Cdx2P43241 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Cdx2P43241 Gm37109-201ENSMUST00000195475 2254 ntBASIC6.54□□□□□ -1.36
Cdx2P43241 Gm23311-201ENSMUST00000104152 134 ntBASIC6.54□□□□□ -1.36
Cdx2P43241 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC6.54□□□□□ -1.36
Cdx2P43241 Gm13642-201ENSMUST00000121697 381 ntBASIC6.54□□□□□ -1.36
Cdx2P43241 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC6.54□□□□□ -1.36
Cdx2P43241 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC6.54□□□□□ -1.36
Cdx2P43241 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC6.54□□□□□ -1.36
Cdx2P43241 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC6.54□□□□□ -1.36
Cdx2P43241 Gm25550-201ENSMUST00000158079 128 ntBASIC6.54□□□□□ -1.36
Cdx2P43241 Gm22523-201ENSMUST00000158696 100 ntBASIC6.54□□□□□ -1.36
Cdx2P43241 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC6.54□□□□□ -1.36
Cdx2P43241 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Cdx2P43241 Gm37328-201ENSMUST00000193191 640 ntBASIC6.54□□□□□ -1.36
Cdx2P43241 Gm43555-201ENSMUST00000196588 310 ntBASIC6.54□□□□□ -1.36
Cdx2P43241 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC6.54□□□□□ -1.36
Cdx2P43241 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC6.54□□□□□ -1.36
Cdx2P43241 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC6.54□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms