Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Mir674-201ENSMUST00000102421 100 ntBASIC6.21□□□□□ -1.42
Nkx2-2P42586 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC6.21□□□□□ -1.42
Nkx2-2P42586 Gm12174-201ENSMUST00000119853 813 ntBASIC6.21□□□□□ -1.42
Nkx2-2P42586 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC6.21□□□□□ -1.42
Nkx2-2P42586 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC6.21□□□□□ -1.42
Nkx2-2P42586 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Nkx2-2P42586 Gm22000-201ENSMUST00000153087 730 ntTSL 5 BASIC6.21□□□□□ -1.42
Nkx2-2P42586 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Nkx2-2P42586 Gm24545-201ENSMUST00000158651 85 ntBASIC6.21□□□□□ -1.42
Nkx2-2P42586 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Nkx2-2P42586 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Nkx2-2P42586 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Nkx2-2P42586 Gm24157-201ENSMUST00000175265 111 ntBASIC6.21□□□□□ -1.42
Nkx2-2P42586 Gm20615-201ENSMUST00000177503 705 ntBASIC6.21□□□□□ -1.42
Nkx2-2P42586 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC6.21□□□□□ -1.42
Nkx2-2P42586 1700028B04Rik-201ENSMUST00000186274 555 ntBASIC6.21□□□□□ -1.42
Nkx2-2P42586 Gm29141-201ENSMUST00000190357 882 ntBASIC6.21□□□□□ -1.42
Nkx2-2P42586 Gm7270-201ENSMUST00000195818 1128 ntBASIC6.21□□□□□ -1.42
Nkx2-2P42586 Gm43160-201ENSMUST00000196453 421 ntBASIC6.21□□□□□ -1.42
Nkx2-2P42586 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Nkx2-2P42586 Gm43089-201ENSMUST00000199162 275 ntBASIC6.21□□□□□ -1.42
Nkx2-2P42586 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC6.21□□□□□ -1.42
Nkx2-2P42586 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC6.21□□□□□ -1.42
Nkx2-2P42586 AC154558.1-201ENSMUST00000222278 415 ntBASIC6.21□□□□□ -1.42
Nkx2-2P42586 CT009495.1-201ENSMUST00000224221 862 ntBASIC6.21□□□□□ -1.42
Nkx2-2P42586 AC091237.1-201ENSMUST00000224911 637 ntBASIC6.21□□□□□ -1.42
Nkx2-2P42586 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Nkx2-2P42586 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC6.21□□□□□ -1.42
Nkx2-2P42586 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.42
Nkx2-2P42586 Gm43335-201ENSMUST00000198299 3276 ntBASIC6.21□□□□□ -1.42
Nkx2-2P42586 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
Nkx2-2P42586 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Nkx2-2P42586 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Nkx2-2P42586 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Nkx2-2P42586 Gm37078-201ENSMUST00000193314 2009 ntBASIC6.21□□□□□ -1.42
Nkx2-2P42586 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Nkx2-2P42586 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Nkx2-2P42586 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Nkx2-2P42586 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Nkx2-2P42586 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Nkx2-2P42586 Gm43343-201ENSMUST00000202454 1926 ntBASIC6.21□□□□□ -1.42
Nkx2-2P42586 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Nkx2-2P42586 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Nkx2-2P42586 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Nkx2-2P42586 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nkx2-2P42586 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC6.2□□□□□ -1.42
Nkx2-2P42586 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Nkx2-2P42586 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Nkx2-2P42586 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nkx2-2P42586 AC124516.2-201ENSMUST00000221455 1829 ntBASIC6.2□□□□□ -1.42
Nkx2-2P42586 Gm44895-201ENSMUST00000206670 1538 ntBASIC6.2□□□□□ -1.42
Nkx2-2P42586 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
Nkx2-2P42586 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nkx2-2P42586 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nkx2-2P42586 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Nkx2-2P42586 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nkx2-2P42586 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Nkx2-2P42586 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Nkx2-2P42586 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC6.2□□□□□ -1.42
Nkx2-2P42586 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC6.2□□□□□ -1.42
Nkx2-2P42586 Gm13732-201ENSMUST00000117753 535 ntBASIC6.2□□□□□ -1.42
Nkx2-2P42586 Gm13265-201ENSMUST00000118090 421 ntBASIC6.2□□□□□ -1.42
Nkx2-2P42586 Gm13877-201ENSMUST00000120614 417 ntBASIC6.2□□□□□ -1.42
Nkx2-2P42586 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC6.2□□□□□ -1.42
Nkx2-2P42586 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC6.2□□□□□ -1.42
Nkx2-2P42586 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC6.2□□□□□ -1.42
Nkx2-2P42586 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC6.2□□□□□ -1.42
Nkx2-2P42586 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC6.2□□□□□ -1.42
Nkx2-2P42586 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC6.2□□□□□ -1.42
Nkx2-2P42586 Gm24781-201ENSMUST00000157636 117 ntBASIC6.2□□□□□ -1.42
Nkx2-2P42586 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC6.2□□□□□ -1.42
Nkx2-2P42586 Gm23810-201ENSMUST00000175150 74 ntBASIC6.2□□□□□ -1.42
Nkx2-2P42586 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC6.2□□□□□ -1.42
Nkx2-2P42586 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC6.2□□□□□ -1.42
Nkx2-2P42586 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC6.2□□□□□ -1.42
Nkx2-2P42586 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC6.2□□□□□ -1.42
Nkx2-2P42586 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Nkx2-2P42586 Gm29383-201ENSMUST00000188284 480 ntBASIC6.2□□□□□ -1.42
Nkx2-2P42586 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC6.2□□□□□ -1.42
Nkx2-2P42586 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC6.2□□□□□ -1.42
Nkx2-2P42586 Gm7867-201ENSMUST00000189856 546 ntBASIC6.2□□□□□ -1.42
Nkx2-2P42586 Gm36932-201ENSMUST00000195226 929 ntBASIC6.2□□□□□ -1.42
Nkx2-2P42586 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC6.2□□□□□ -1.42
Nkx2-2P42586 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC6.2□□□□□ -1.42
Nkx2-2P42586 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nkx2-2P42586 AC159246.1-201ENSMUST00000214478 249 ntBASIC6.2□□□□□ -1.42
Nkx2-2P42586 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Nkx2-2P42586 AC155834.1-201ENSMUST00000220033 498 ntBASIC6.2□□□□□ -1.42
Nkx2-2P42586 Gm35619-201ENSMUST00000222548 600 ntBASIC6.2□□□□□ -1.42
Nkx2-2P42586 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Nkx2-2P42586 AC138329.1-201ENSMUST00000225040 471 ntBASIC6.2□□□□□ -1.42
Nkx2-2P42586 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nkx2-2P42586 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Nkx2-2P42586 Mir196a-1-201ENSMUST00000083612 102 ntBASIC6.2□□□□□ -1.42
Nkx2-2P42586 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC6.2□□□□□ -1.42
Nkx2-2P42586 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nkx2-2P42586 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Nkx2-2P42586 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
Nkx2-2P42586 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Nkx2-2P42586 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms