Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Sox6P40645 Gm42989-201ENSMUST00000200646 2306 ntBASIC6.37□□□□□ -1.39
Sox6P40645 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Sox6P40645 AC116476.1-201ENSMUST00000226274 2318 ntBASIC6.37□□□□□ -1.39
Sox6P40645 CT030185.1-201ENSMUST00000222940 2289 ntBASIC6.37□□□□□ -1.39
Sox6P40645 Gm45061-201ENSMUST00000204395 2095 ntBASIC6.37□□□□□ -1.39
Sox6P40645 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC6.37□□□□□ -1.39
Sox6P40645 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Sox6P40645 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
Sox6P40645 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Sox6P40645 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Sox6P40645 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Sox6P40645 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC6.37□□□□□ -1.39
Sox6P40645 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC6.37□□□□□ -1.39
Sox6P40645 Gm8812-201ENSMUST00000118496 412 ntBASIC6.37□□□□□ -1.39
Sox6P40645 Gm11972-201ENSMUST00000118514 389 ntBASIC6.37□□□□□ -1.39
Sox6P40645 Gm14727-201ENSMUST00000118526 525 ntBASIC6.37□□□□□ -1.39
Sox6P40645 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC6.37□□□□□ -1.39
Sox6P40645 Gm12879-201ENSMUST00000120003 1182 ntBASIC6.37□□□□□ -1.39
Sox6P40645 Gm14721-201ENSMUST00000121381 525 ntBASIC6.37□□□□□ -1.39
Sox6P40645 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC6.37□□□□□ -1.39
Sox6P40645 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Sox6P40645 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Sox6P40645 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Sox6P40645 Gm27026-201ENSMUST00000183003 892 ntBASIC6.37□□□□□ -1.39
Sox6P40645 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC6.37□□□□□ -1.39
Sox6P40645 Mir7084-201ENSMUST00000183876 70 ntBASIC6.37□□□□□ -1.39
Sox6P40645 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC6.37□□□□□ -1.39
Sox6P40645 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC6.37□□□□□ -1.39
Sox6P40645 Lamtor3-203ENSMUST00000197064 733 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
Sox6P40645 Gm17833-201ENSMUST00000197629 1065 ntBASIC6.37□□□□□ -1.39
Sox6P40645 Gm8539-201ENSMUST00000199822 501 ntBASIC6.37□□□□□ -1.39
Sox6P40645 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC6.37□□□□□ -1.39
Sox6P40645 Gm44722-201ENSMUST00000206473 436 ntBASIC6.37□□□□□ -1.39
Sox6P40645 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Sox6P40645 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC6.37□□□□□ -1.39
Sox6P40645 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC6.37□□□□□ -1.39
Sox6P40645 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Sox6P40645 Gm36758-201ENSMUST00000222594 310 ntBASIC6.37□□□□□ -1.39
Sox6P40645 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Sox6P40645 AV026068-219ENSMUST00000224148 933 ntBASIC6.37□□□□□ -1.39
Sox6P40645 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Sox6P40645 Gm16020-201ENSMUST00000084281 210 ntBASIC6.37□□□□□ -1.39
Sox6P40645 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
Sox6P40645 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Sox6P40645 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC6.37□□□□□ -1.39
Sox6P40645 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC6.37□□□□□ -1.39
Sox6P40645 Gm42940-201ENSMUST00000200361 2362 ntBASIC6.37□□□□□ -1.39
Sox6P40645 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Sox6P40645 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Sox6P40645 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Sox6P40645 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC6.37□□□□□ -1.39
Sox6P40645 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Sox6P40645 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Sox6P40645 Gm10555-201ENSMUST00000193178 1791 ntBASIC6.36□□□□□ -1.39
Sox6P40645 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
Sox6P40645 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Sox6P40645 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Sox6P40645 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC6.36□□□□□ -1.39
Sox6P40645 AC120347.1-201ENSMUST00000223326 1639 ntBASIC6.36□□□□□ -1.39
Sox6P40645 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Sox6P40645 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Sox6P40645 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Sox6P40645 Gm38077-201ENSMUST00000193657 3245 ntBASIC6.36□□□□□ -1.39
Sox6P40645 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
Sox6P40645 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC6.36□□□□□ -1.39
Sox6P40645 Gm23437-201ENSMUST00000104036 127 ntBASIC6.36□□□□□ -1.39
Sox6P40645 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Sox6P40645 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC6.36□□□□□ -1.39
Sox6P40645 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC6.36□□□□□ -1.39
Sox6P40645 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC6.36□□□□□ -1.39
Sox6P40645 Gm15105-201ENSMUST00000117777 204 ntBASIC6.36□□□□□ -1.39
Sox6P40645 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC6.36□□□□□ -1.39
Sox6P40645 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC6.36□□□□□ -1.39
Sox6P40645 Gm14457-201ENSMUST00000148069 1161 ntBASIC6.36□□□□□ -1.39
Sox6P40645 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Sox6P40645 Gm24826-202ENSMUST00000197298 216 ntBASIC6.36□□□□□ -1.39
Sox6P40645 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC6.36□□□□□ -1.39
Sox6P40645 Gm21461-201ENSMUST00000200382 863 ntBASIC6.36□□□□□ -1.39
Sox6P40645 Gm42673-201ENSMUST00000202676 337 ntBASIC6.36□□□□□ -1.39
Sox6P40645 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Sox6P40645 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Sox6P40645 AC151901.1-201ENSMUST00000218274 180 ntBASIC6.36□□□□□ -1.39
Sox6P40645 Gm17611-202ENSMUST00000220613 814 ntBASIC6.36□□□□□ -1.39
Sox6P40645 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC6.36□□□□□ -1.39
Sox6P40645 AC163660.1-201ENSMUST00000223696 818 ntBASIC6.36□□□□□ -1.39
Sox6P40645 AC154692.1-202ENSMUST00000226632 1231 ntBASIC6.36□□□□□ -1.39
Sox6P40645 Tmem213-201ENSMUST00000031851 631 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Sox6P40645 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Sox6P40645 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Sox6P40645 Mir455-201ENSMUST00000093594 82 ntBASIC6.36□□□□□ -1.39
Sox6P40645 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Sox6P40645 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Sox6P40645 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Sox6P40645 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Sox6P40645 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Sox6P40645 Gm43502-201ENSMUST00000200263 2596 ntBASIC6.36□□□□□ -1.39
Sox6P40645 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Sox6P40645 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sox6P40645 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms