Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 AC154461.5-201ENSMUST00000225429 774 ntBASIC6.03□□□□□ -1.44
P20040 CT009556.4-201ENSMUST00000227092 200 ntBASIC6.03□□□□□ -1.44
P20040 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
P20040 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
P20040 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
P20040 Mir138-2-201ENSMUST00000083578 71 ntBASIC6.03□□□□□ -1.44
P20040 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
P20040 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
P20040 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
P20040 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
P20040 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
P20040 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
P20040 Gm37410-201ENSMUST00000193623 3039 ntBASIC6.03□□□□□ -1.44
P20040 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
P20040 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
P20040 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
P20040 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
P20040 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC6.03□□□□□ -1.44
P20040 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
P20040 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
P20040 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
P20040 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
P20040 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
P20040 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC6.02□□□□□ -1.45
P20040 AC153971.1-201ENSMUST00000215097 3811 ntBASIC6.02□□□□□ -1.45
P20040 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
P20040 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
P20040 Gm44620-201ENSMUST00000209183 2887 ntBASIC6.02□□□□□ -1.45
P20040 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
P20040 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
P20040 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
P20040 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC6.02□□□□□ -1.45
P20040 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
P20040 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
P20040 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
P20040 Gm25396-201ENSMUST00000103981 133 ntBASIC6.02□□□□□ -1.45
P20040 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
P20040 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC6.02□□□□□ -1.45
P20040 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC6.02□□□□□ -1.45
P20040 Gm13878-201ENSMUST00000117986 577 ntBASIC6.02□□□□□ -1.45
P20040 Gm8812-201ENSMUST00000118496 412 ntBASIC6.02□□□□□ -1.45
P20040 Gm7599-201ENSMUST00000121453 796 ntBASIC6.02□□□□□ -1.45
P20040 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC6.02□□□□□ -1.45
P20040 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
P20040 Gm17212-201ENSMUST00000166666 259 ntBASIC6.02□□□□□ -1.45
P20040 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
P20040 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
P20040 Gm27001-201ENSMUST00000182252 936 ntBASIC6.02□□□□□ -1.45
P20040 Gm27204-201ENSMUST00000184673 527 ntTSL 2 BASIC6.02□□□□□ -1.45
P20040 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
P20040 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC6.02□□□□□ -1.45
P20040 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC6.02□□□□□ -1.45
P20040 Gm43595-201ENSMUST00000196464 1071 ntBASIC6.02□□□□□ -1.45
P20040 Gm43656-201ENSMUST00000197882 434 ntBASIC6.02□□□□□ -1.45
P20040 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC6.02□□□□□ -1.45
P20040 Gm44823-201ENSMUST00000204775 1107 ntBASIC6.02□□□□□ -1.45
P20040 Gm9604-201ENSMUST00000211175 433 ntBASIC6.02□□□□□ -1.45
P20040 Gm45725-201ENSMUST00000212962 337 ntBASIC6.02□□□□□ -1.45
P20040 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC6.02□□□□□ -1.45
P20040 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
P20040 AC151971.2-201ENSMUST00000217540 909 ntBASIC6.02□□□□□ -1.45
P20040 AC155834.1-201ENSMUST00000220033 498 ntBASIC6.02□□□□□ -1.45
P20040 Gm5374-202ENSMUST00000222910 314 ntBASIC6.02□□□□□ -1.45
P20040 CT030705.2-201ENSMUST00000225301 556 ntBASIC6.02□□□□□ -1.45
P20040 AC115304.1-202ENSMUST00000226850 837 ntBASIC6.02□□□□□ -1.45
P20040 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
P20040 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
P20040 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
P20040 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC6.02□□□□□ -1.45
P20040 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
P20040 Gm16020-201ENSMUST00000084281 210 ntBASIC6.02□□□□□ -1.45
P20040 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
P20040 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
P20040 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
P20040 Gm10555-201ENSMUST00000193178 1791 ntBASIC6.02□□□□□ -1.45
P20040 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
P20040 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
P20040 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
P20040 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
P20040 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC6.02□□□□□ -1.45
P20040 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
P20040 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
P20040 Nsd1-207ENSMUST00000224973 9905 ntBASIC6.02□□□□□ -1.45
P20040 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
P20040 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
P20040 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
P20040 Gm33167-201ENSMUST00000201933 2643 ntBASIC6.02□□□□□ -1.45
P20040 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
P20040 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
P20040 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC6.02□□□□□ -1.45
P20040 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
P20040 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
P20040 Gm44441-201ENSMUST00000203642 2475 ntBASIC6.02□□□□□ -1.45
P20040 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
P20040 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
P20040 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC6.02□□□□□ -1.45
P20040 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
P20040 AC131687.1-201ENSMUST00000225931 5446 ntBASIC6.01□□□□□ -1.45
P20040 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
P20040 Gm11342-203ENSMUST00000224879 1324 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms