Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm5119-201ENSMUST00000215858 634 ntBASIC7.39□□□□□ -1.23
Chmp6P0C0A3 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Chmp6P0C0A3 Gm22053-201ENSMUST00000083394 200 ntBASIC7.39□□□□□ -1.23
Chmp6P0C0A3 AC117608.1-201ENSMUST00000225500 3418 ntBASIC7.39□□□□□ -1.23
Chmp6P0C0A3 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Chmp6P0C0A3 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Chmp6P0C0A3 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Chmp6P0C0A3 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Chmp6P0C0A3 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC7.39□□□□□ -1.23
Chmp6P0C0A3 Gm37107-201ENSMUST00000195326 2552 ntBASIC7.39□□□□□ -1.23
Chmp6P0C0A3 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Chmp6P0C0A3 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Chmp6P0C0A3 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Chmp6P0C0A3 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Chmp6P0C0A3 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Chmp6P0C0A3 Gm44553-201ENSMUST00000206316 2037 ntBASIC7.39□□□□□ -1.23
Chmp6P0C0A3 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Chmp6P0C0A3 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Chmp6P0C0A3 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Chmp6P0C0A3 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Chmp6P0C0A3 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC7.38□□□□□ -1.23
Chmp6P0C0A3 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Chmp6P0C0A3 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC7.38□□□□□ -1.23
Chmp6P0C0A3 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Chmp6P0C0A3 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Chmp6P0C0A3 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC7.38□□□□□ -1.23
Chmp6P0C0A3 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC7.38□□□□□ -1.23
Chmp6P0C0A3 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC7.38□□□□□ -1.23
Chmp6P0C0A3 Gm4911-201ENSMUST00000119388 945 ntBASIC7.38□□□□□ -1.23
Chmp6P0C0A3 Gm12174-201ENSMUST00000119853 813 ntBASIC7.38□□□□□ -1.23
Chmp6P0C0A3 Gm14796-201ENSMUST00000121216 959 ntBASIC7.38□□□□□ -1.23
Chmp6P0C0A3 Gm5809-201ENSMUST00000121854 529 ntBASIC7.38□□□□□ -1.23
Chmp6P0C0A3 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Chmp6P0C0A3 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC7.38□□□□□ -1.23
Chmp6P0C0A3 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC7.38□□□□□ -1.23
Chmp6P0C0A3 Gm9672-201ENSMUST00000166437 425 ntBASIC7.38□□□□□ -1.23
Chmp6P0C0A3 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC7.38□□□□□ -1.23
Chmp6P0C0A3 Gm27178-201ENSMUST00000184962 340 ntBASIC7.38□□□□□ -1.23
Chmp6P0C0A3 Gm43141-201ENSMUST00000199695 274 ntBASIC7.38□□□□□ -1.23
Chmp6P0C0A3 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Chmp6P0C0A3 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC7.38□□□□□ -1.23
Chmp6P0C0A3 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC7.38□□□□□ -1.23
Chmp6P0C0A3 AC155270.1-202ENSMUST00000221503 352 ntBASIC7.38□□□□□ -1.23
Chmp6P0C0A3 AC156790.1-201ENSMUST00000226572 559 ntBASIC7.38□□□□□ -1.23
Chmp6P0C0A3 AC154806.5-204ENSMUST00000228900 867 ntBASIC7.38□□□□□ -1.23
Chmp6P0C0A3 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Chmp6P0C0A3 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Chmp6P0C0A3 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Chmp6P0C0A3 Gm44704-201ENSMUST00000208963 1990 ntBASIC7.38□□□□□ -1.23
Chmp6P0C0A3 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC7.38□□□□□ -1.23
Chmp6P0C0A3 Gm6679-201ENSMUST00000191467 1869 ntBASIC7.38□□□□□ -1.23
Chmp6P0C0A3 AC122024.1-201ENSMUST00000219276 4850 ntBASIC7.38□□□□□ -1.23
Chmp6P0C0A3 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Chmp6P0C0A3 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Chmp6P0C0A3 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Chmp6P0C0A3 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Chmp6P0C0A3 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC7.37□□□□□ -1.23
Chmp6P0C0A3 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC7.37□□□□□ -1.23
Chmp6P0C0A3 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Chmp6P0C0A3 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC7.37□□□□□ -1.23
Chmp6P0C0A3 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC7.37□□□□□ -1.23
Chmp6P0C0A3 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Chmp6P0C0A3 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC7.37□□□□□ -1.23
Chmp6P0C0A3 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC7.37□□□□□ -1.23
Chmp6P0C0A3 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC7.37□□□□□ -1.23
Chmp6P0C0A3 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC7.37□□□□□ -1.23
Chmp6P0C0A3 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Chmp6P0C0A3 AC093022.3-201ENSMUST00000226569 1926 ntBASIC7.37□□□□□ -1.23
Chmp6P0C0A3 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Chmp6P0C0A3 Gm6327-201ENSMUST00000171185 1335 ntBASIC7.37□□□□□ -1.23
Chmp6P0C0A3 Gm19024-201ENSMUST00000194681 1319 ntBASIC7.37□□□□□ -1.23
Chmp6P0C0A3 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Chmp6P0C0A3 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Chmp6P0C0A3 Gm15310-201ENSMUST00000117891 372 ntBASIC7.37□□□□□ -1.23
Chmp6P0C0A3 Gm11833-201ENSMUST00000118393 853 ntBASIC7.37□□□□□ -1.23
Chmp6P0C0A3 Gm15616-201ENSMUST00000118662 375 ntBASIC7.37□□□□□ -1.23
Chmp6P0C0A3 Gm11198-201ENSMUST00000119771 974 ntBASIC7.37□□□□□ -1.23
Chmp6P0C0A3 Gm12181-201ENSMUST00000121448 531 ntBASIC7.37□□□□□ -1.23
Chmp6P0C0A3 Gm15242-201ENSMUST00000122459 283 ntBASIC7.37□□□□□ -1.23
Chmp6P0C0A3 Gm16248-201ENSMUST00000124238 243 ntBASIC7.37□□□□□ -1.23
Chmp6P0C0A3 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC7.37□□□□□ -1.23
Chmp6P0C0A3 Gm14503-201ENSMUST00000130337 1164 ntBASIC7.37□□□□□ -1.23
Chmp6P0C0A3 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Chmp6P0C0A3 Gm23276-201ENSMUST00000157913 138 ntBASIC7.37□□□□□ -1.23
Chmp6P0C0A3 Gm26025-201ENSMUST00000158655 271 ntBASIC7.37□□□□□ -1.23
Chmp6P0C0A3 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Chmp6P0C0A3 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Chmp6P0C0A3 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Chmp6P0C0A3 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC7.37□□□□□ -1.23
Chmp6P0C0A3 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Chmp6P0C0A3 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC7.37□□□□□ -1.23
Chmp6P0C0A3 AC151904.5-201ENSMUST00000218975 549 ntBASIC7.37□□□□□ -1.23
Chmp6P0C0A3 Gm9231-201ENSMUST00000220817 1009 ntBASIC7.37□□□□□ -1.23
Chmp6P0C0A3 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC7.37□□□□□ -1.23
Chmp6P0C0A3 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC7.37□□□□□ -1.23
Chmp6P0C0A3 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC7.37□□□□□ -1.23
Chmp6P0C0A3 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC7.37□□□□□ -1.23
Chmp6P0C0A3 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Chmp6P0C0A3 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Chmp6P0C0A3 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms