Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm16508-201ENSMUST00000197066 2742 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Hoxd3P09027 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC6.55□□□□□ -1.36
Hoxd3P09027 Ddr2-202ENSMUST00000170800 8289 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Hoxd3P09027 Slco1c1-206ENSMUST00000205214 2515 ntTSL 5 BASIC6.55□□□□□ -1.36
Hoxd3P09027 Uba1-202ENSMUST00000089217 4044 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Hoxd3P09027 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Hoxd3P09027 Gas8-203ENSMUST00000212923 3469 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Hoxd3P09027 Strn-201ENSMUST00000024881 2967 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Hoxd3P09027 Aldh7a1-208ENSMUST00000174518 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Hoxd3P09027 Gm37069-201ENSMUST00000192742 4142 ntBASIC6.55□□□□□ -1.36
Hoxd3P09027 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Hoxd3P09027 Pnlip-201ENSMUST00000057270 1485 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Hoxd3P09027 Ogdhl-201ENSMUST00000022480 3449 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
Hoxd3P09027 Cnpy1-203ENSMUST00000120068 2284 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Hoxd3P09027 Fam13a-201ENSMUST00000089860 5786 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Hoxd3P09027 2010111I01Rik-202ENSMUST00000091560 3509 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Hoxd3P09027 Gm15834-201ENSMUST00000129740 2097 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Hoxd3P09027 Igkv6-29-201ENSMUST00000103379 344 ntAPPRIS ALT2 BASIC6.55□□□□□ -1.36
Hoxd3P09027 Arpc3-204ENSMUST00000111716 838 ntTSL 2 BASIC6.55□□□□□ -1.36
Hoxd3P09027 Mir669g-201ENSMUST00000116809 123 ntBASIC6.55□□□□□ -1.36
Hoxd3P09027 Gm15988-201ENSMUST00000118677 367 ntBASIC6.55□□□□□ -1.36
Hoxd3P09027 Gm14783-201ENSMUST00000118900 663 ntBASIC6.55□□□□□ -1.36
Hoxd3P09027 Gm7645-201ENSMUST00000119008 788 ntBASIC6.55□□□□□ -1.36
Hoxd3P09027 Gm12817-201ENSMUST00000119622 610 ntBASIC6.55□□□□□ -1.36
Hoxd3P09027 Gm15019-201ENSMUST00000120148 434 ntBASIC6.55□□□□□ -1.36
Hoxd3P09027 Gm14620-201ENSMUST00000120656 383 ntBASIC6.55□□□□□ -1.36
Hoxd3P09027 Gm12807-201ENSMUST00000121546 962 ntBASIC6.55□□□□□ -1.36
Hoxd3P09027 Gm14784-201ENSMUST00000121604 663 ntBASIC6.55□□□□□ -1.36
Hoxd3P09027 Gm11897-201ENSMUST00000121976 828 ntBASIC6.55□□□□□ -1.36
Hoxd3P09027 Gm12780-201ENSMUST00000122458 645 ntBASIC6.55□□□□□ -1.36
Hoxd3P09027 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC6.55□□□□□ -1.36
Hoxd3P09027 Gm11722-201ENSMUST00000138702 534 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Hoxd3P09027 Gm6706-201ENSMUST00000145087 318 ntBASIC6.55□□□□□ -1.36
Hoxd3P09027 Gm16259-201ENSMUST00000145241 553 ntBASIC6.55□□□□□ -1.36
Hoxd3P09027 Vmn2r-ps87-201ENSMUST00000174393 876 ntBASIC6.55□□□□□ -1.36
Hoxd3P09027 Gm15257-201ENSMUST00000177680 883 ntBASIC6.55□□□□□ -1.36
Hoxd3P09027 Gm15252-201ENSMUST00000177750 883 ntBASIC6.55□□□□□ -1.36
Hoxd3P09027 Gm25598-201ENSMUST00000179031 107 ntBASIC6.55□□□□□ -1.36
Hoxd3P09027 Gm15260-201ENSMUST00000179402 883 ntBASIC6.55□□□□□ -1.36
Hoxd3P09027 Gm6410-201ENSMUST00000181337 1105 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Hoxd3P09027 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC6.55□□□□□ -1.36
Hoxd3P09027 Gm7132-201ENSMUST00000182302 984 ntBASIC6.55□□□□□ -1.36
Hoxd3P09027 Gm27762-201ENSMUST00000183417 109 ntBASIC6.55□□□□□ -1.36
Hoxd3P09027 Gm28418-201ENSMUST00000186179 423 ntBASIC6.55□□□□□ -1.36
Hoxd3P09027 Gm28285-204ENSMUST00000187793 601 ntAPPRIS P5 TSL 5 BASIC6.55□□□□□ -1.36
Hoxd3P09027 Gm28843-201ENSMUST00000189198 678 ntBASIC6.55□□□□□ -1.36
Hoxd3P09027 Gm17777-201ENSMUST00000189740 1276 ntBASIC6.55□□□□□ -1.36
Hoxd3P09027 Gm29546-201ENSMUST00000191171 678 ntBASIC6.55□□□□□ -1.36
Hoxd3P09027 Gm37825-201ENSMUST00000193141 904 ntTSL 5 BASIC6.55□□□□□ -1.36
Hoxd3P09027 Zc2hc1b-201ENSMUST00000019954 1157 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Hoxd3P09027 Gm5723-201ENSMUST00000203096 432 ntBASIC6.55□□□□□ -1.36
Hoxd3P09027 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC6.55□□□□□ -1.36
Hoxd3P09027 Gm8168-201ENSMUST00000209631 948 ntBASIC6.55□□□□□ -1.36
Hoxd3P09027 5830408C22Rik-204ENSMUST00000211653 351 ntTSL 3 BASIC6.55□□□□□ -1.36
Hoxd3P09027 AC127224.1-201ENSMUST00000218094 453 ntBASIC6.55□□□□□ -1.36
Hoxd3P09027 Gm34574-202ENSMUST00000219433 1108 ntTSL 5 BASIC6.55□□□□□ -1.36
Hoxd3P09027 Gm18113-201ENSMUST00000220630 303 ntBASIC6.55□□□□□ -1.36
Hoxd3P09027 AC164424.1-201ENSMUST00000221690 170 ntBASIC6.55□□□□□ -1.36
Hoxd3P09027 CT485612.3-201ENSMUST00000222179 408 ntBASIC6.55□□□□□ -1.36
Hoxd3P09027 AC129975.2-201ENSMUST00000223705 775 ntBASIC6.55□□□□□ -1.36
Hoxd3P09027 Zfp874a-208ENSMUST00000225479 1092 ntBASIC6.55□□□□□ -1.36
Hoxd3P09027 AC122251.1-201ENSMUST00000227717 639 ntBASIC6.55□□□□□ -1.36
Hoxd3P09027 Cox8c-201ENSMUST00000053611 458 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Hoxd3P09027 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Hoxd3P09027 Olfr1402-201ENSMUST00000060912 963 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Hoxd3P09027 Chn1-201ENSMUST00000070579 1023 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Hoxd3P09027 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Hoxd3P09027 Tcl1b3-201ENSMUST00000090990 1045 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Hoxd3P09027 Tmem241-203ENSMUST00000092075 595 ntAPPRIS ALT2 TSL 3 BASIC6.55□□□□□ -1.36
Hoxd3P09027 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Hoxd3P09027 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Hoxd3P09027 9330162B11Rik-201ENSMUST00000195397 2212 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Hoxd3P09027 Nup98-203ENSMUST00000210682 6694 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Hoxd3P09027 Gm7328-201ENSMUST00000211123 2225 ntBASIC6.55□□□□□ -1.36
Hoxd3P09027 Trpm8-201ENSMUST00000040210 4146 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Hoxd3P09027 Gm15975-201ENSMUST00000122385 1402 ntBASIC6.55□□□□□ -1.36
Hoxd3P09027 1700108F19Rik-205ENSMUST00000190818 1412 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Hoxd3P09027 Ppp2r3a-202ENSMUST00000075941 6786 ntTSL 5 BASIC6.55□□□□□ -1.36
Hoxd3P09027 Pkib-201ENSMUST00000066028 1552 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Hoxd3P09027 Hdac4-201ENSMUST00000008995 3937 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Hoxd3P09027 Selenop-201ENSMUST00000082424 2013 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Hoxd3P09027 Sars-201ENSMUST00000090553 3570 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Hoxd3P09027 9330136K24Rik-201ENSMUST00000180842 2478 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Hoxd3P09027 1600015I10Rik-201ENSMUST00000031837 2485 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Hoxd3P09027 Gdpgp1-201ENSMUST00000062915 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Hoxd3P09027 Cdon-201ENSMUST00000042842 7213 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Hoxd3P09027 Gm26996-201ENSMUST00000204418 1359 ntBASIC6.55□□□□□ -1.36
Hoxd3P09027 BC106179-201ENSMUST00000055369 4128 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Hoxd3P09027 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Hoxd3P09027 Dennd6a-205ENSMUST00000224378 2424 ntBASIC6.55□□□□□ -1.36
Hoxd3P09027 Serinc4-201ENSMUST00000056312 2551 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Hoxd3P09027 Elovl4-201ENSMUST00000034796 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Hoxd3P09027 Olfr117-202ENSMUST00000213638 3183 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Hoxd3P09027 Nedd4-209ENSMUST00000184450 3329 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Hoxd3P09027 Cenpo-205ENSMUST00000140975 4348 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxd3P09027 Dnaic1-201ENSMUST00000102963 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxd3P09027 Tsnaxip1-201ENSMUST00000034365 2210 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm8362-201ENSMUST00000168790 1762 ntAPPRIS P5 TSL 5 BASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm42737-201ENSMUST00000201074 1755 ntBASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm44224-201ENSMUST00000204131 1463 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms