Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
Hmgb3O54879 AC131654.1-201ENSMUST00000219675 745 ntBASIC5.47□□□□□ -1.53
Hmgb3O54879 RMST_1.1-213ENSMUST00000220288 792 ntTSL 5 BASIC5.47□□□□□ -1.53
Hmgb3O54879 Tmem216-201ENSMUST00000025569 1101 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Hmgb3O54879 Ifitm5-201ENSMUST00000026562 765 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Hmgb3O54879 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Hmgb3O54879 Gm8186-201ENSMUST00000053575 386 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Hmgb3O54879 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Hmgb3O54879 Gm45457-201ENSMUST00000209931 3089 ntBASIC5.47□□□□□ -1.53
Hmgb3O54879 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Hmgb3O54879 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Hmgb3O54879 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Hmgb3O54879 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC5.47□□□□□ -1.53
Hmgb3O54879 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Hmgb3O54879 AC129308.2-203ENSMUST00000224109 2385 ntBASIC5.47□□□□□ -1.53
Hmgb3O54879 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
Hmgb3O54879 Gm42613-201ENSMUST00000199975 1931 ntBASIC5.46□□□□□ -1.53
Hmgb3O54879 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
Hmgb3O54879 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Hmgb3O54879 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Hmgb3O54879 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Hmgb3O54879 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC5.46□□□□□ -1.54
Hmgb3O54879 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Hmgb3O54879 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Hmgb3O54879 Gm44215-201ENSMUST00000204910 2711 ntBASIC5.46□□□□□ -1.54
Hmgb3O54879 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Hmgb3O54879 Gm11207-201ENSMUST00000117824 414 ntBASIC5.46□□□□□ -1.54
Hmgb3O54879 Gm12601-201ENSMUST00000118994 846 ntBASIC5.46□□□□□ -1.54
Hmgb3O54879 Gm13221-201ENSMUST00000121712 430 ntBASIC5.46□□□□□ -1.54
Hmgb3O54879 Gm25845-201ENSMUST00000122588 310 ntBASIC5.46□□□□□ -1.54
Hmgb3O54879 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Hmgb3O54879 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Hmgb3O54879 Ighv1-62-2-201ENSMUST00000163467 302 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Hmgb3O54879 Ighv1-71-201ENSMUST00000166645 302 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Hmgb3O54879 Gm20638-201ENSMUST00000175796 550 ntTSL 5 BASIC5.46□□□□□ -1.54
Hmgb3O54879 Gm6176-201ENSMUST00000178209 906 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Hmgb3O54879 Gm24307-201ENSMUST00000178512 101 ntBASIC5.46□□□□□ -1.54
Hmgb3O54879 Gm4373-201ENSMUST00000178571 556 ntBASIC5.46□□□□□ -1.54
Hmgb3O54879 Gm4567-201ENSMUST00000178591 906 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Hmgb3O54879 Gm4956-202ENSMUST00000178869 672 ntBASIC5.46□□□□□ -1.54
Hmgb3O54879 Gm10668-201ENSMUST00000179491 906 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Hmgb3O54879 Gm4545-201ENSMUST00000190797 603 ntBASIC5.46□□□□□ -1.54
Hmgb3O54879 Gm3841-201ENSMUST00000191399 451 ntBASIC5.46□□□□□ -1.54
Hmgb3O54879 Gm28070-201ENSMUST00000191502 445 ntBASIC5.46□□□□□ -1.54
Hmgb3O54879 Gm18430-201ENSMUST00000197534 682 ntBASIC5.46□□□□□ -1.54
Hmgb3O54879 Mir1897-202ENSMUST00000198006 79 ntBASIC5.46□□□□□ -1.54
Hmgb3O54879 Gm17660-203ENSMUST00000198485 522 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Hmgb3O54879 Gm18131-201ENSMUST00000199241 449 ntBASIC5.46□□□□□ -1.54
Hmgb3O54879 Gm3511-201ENSMUST00000199823 204 ntBASIC5.46□□□□□ -1.54
Hmgb3O54879 Gm44565-201ENSMUST00000208194 269 ntBASIC5.46□□□□□ -1.54
Hmgb3O54879 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Hmgb3O54879 Gm39059-201ENSMUST00000209160 424 ntTSL 5 BASIC5.46□□□□□ -1.54
Hmgb3O54879 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC5.46□□□□□ -1.54
Hmgb3O54879 Gm19116-201ENSMUST00000218592 642 ntBASIC5.46□□□□□ -1.54
Hmgb3O54879 AC124687.3-201ENSMUST00000222865 875 ntTSL 5 BASIC5.46□□□□□ -1.54
Hmgb3O54879 CT010472.1-201ENSMUST00000224000 704 ntBASIC5.46□□□□□ -1.54
Hmgb3O54879 AC187103.4-201ENSMUST00000225399 300 ntBASIC5.46□□□□□ -1.54
Hmgb3O54879 AC125539.1-201ENSMUST00000227423 622 ntBASIC5.46□□□□□ -1.54
Hmgb3O54879 AC131029.2-203ENSMUST00000228116 1244 ntBASIC5.46□□□□□ -1.54
Hmgb3O54879 Yipf7-201ENSMUST00000031045 1219 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Hmgb3O54879 Klrk1-202ENSMUST00000095412 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Hmgb3O54879 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Hmgb3O54879 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC5.46□□□□□ -1.54
Hmgb3O54879 Gm17300-201ENSMUST00000172202 1527 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Hmgb3O54879 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Hmgb3O54879 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Hmgb3O54879 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Hmgb3O54879 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Hmgb3O54879 Gm38156-201ENSMUST00000194601 2260 ntBASIC5.46□□□□□ -1.54
Hmgb3O54879 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Hmgb3O54879 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
Hmgb3O54879 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Hmgb3O54879 Gm13106-201ENSMUST00000119045 1443 ntBASIC5.46□□□□□ -1.54
Hmgb3O54879 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Hmgb3O54879 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Hmgb3O54879 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Hmgb3O54879 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC5.46□□□□□ -1.54
Hmgb3O54879 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
Hmgb3O54879 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC5.46□□□□□ -1.54
Hmgb3O54879 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Hmgb3O54879 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Hmgb3O54879 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Hmgb3O54879 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Hmgb3O54879 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC5.45□□□□□ -1.54
Hmgb3O54879 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Hmgb3O54879 Tmem175-201ENSMUST00000063272 3956 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Hmgb3O54879 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
Hmgb3O54879 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Hmgb3O54879 Gm43330-201ENSMUST00000199706 2153 ntBASIC5.45□□□□□ -1.54
Hmgb3O54879 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Hmgb3O54879 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Hmgb3O54879 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC5.45□□□□□ -1.54
Hmgb3O54879 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Hmgb3O54879 Gm10639-201ENSMUST00000119823 993 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Hmgb3O54879 Gm14053-201ENSMUST00000121662 470 ntBASIC5.45□□□□□ -1.54
Hmgb3O54879 Gm14830-201ENSMUST00000121899 700 ntBASIC5.45□□□□□ -1.54
Hmgb3O54879 1700021N21Rik-201ENSMUST00000131110 904 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Hmgb3O54879 Gm16034-201ENSMUST00000156446 480 ntTSL 2 BASIC5.45□□□□□ -1.54
Hmgb3O54879 Gm24286-201ENSMUST00000157632 128 ntBASIC5.45□□□□□ -1.54
Hmgb3O54879 Gm17217-201ENSMUST00000166613 469 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms