Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Ttc26-205ENSMUST00000162554 4195 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col4a6B1AVK5 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col4a6B1AVK5 Atr-201ENSMUST00000034980 8056 ntTSL 5 BASIC6.95□□□□□ -1.3
Col4a6B1AVK5 Gm16204-201ENSMUST00000117864 1897 ntBASIC6.95□□□□□ -1.3
Col4a6B1AVK5 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col4a6B1AVK5 Acad11-201ENSMUST00000047799 3444 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col4a6B1AVK5 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Col4a6B1AVK5 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Col4a6B1AVK5 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col4a6B1AVK5 Klhl32-203ENSMUST00000108214 5970 ntTSL 5 BASIC6.95□□□□□ -1.3
Col4a6B1AVK5 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Col4a6B1AVK5 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC6.95□□□□□ -1.3
Col4a6B1AVK5 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Col4a6B1AVK5 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Col4a6B1AVK5 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC6.95□□□□□ -1.3
Col4a6B1AVK5 Gm18752-201ENSMUST00000192876 608 ntBASIC6.95□□□□□ -1.3
Col4a6B1AVK5 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC6.95□□□□□ -1.3
Col4a6B1AVK5 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC6.95□□□□□ -1.3
Col4a6B1AVK5 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC6.95□□□□□ -1.3
Col4a6B1AVK5 Gm5717-201ENSMUST00000198243 1062 ntBASIC6.95□□□□□ -1.3
Col4a6B1AVK5 Gm18805-201ENSMUST00000206872 655 ntBASIC6.95□□□□□ -1.3
Col4a6B1AVK5 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC6.95□□□□□ -1.3
Col4a6B1AVK5 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC6.95□□□□□ -1.3
Col4a6B1AVK5 Gm18103-201ENSMUST00000216621 779 ntBASIC6.95□□□□□ -1.3
Col4a6B1AVK5 AC211878.6-201ENSMUST00000221896 358 ntBASIC6.95□□□□□ -1.3
Col4a6B1AVK5 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC6.95□□□□□ -1.3
Col4a6B1AVK5 AC154634.2-201ENSMUST00000225983 1184 ntBASIC6.95□□□□□ -1.3
Col4a6B1AVK5 AC113125.2-201ENSMUST00000226837 362 ntBASIC6.95□□□□□ -1.3
Col4a6B1AVK5 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC6.95□□□□□ -1.3
Col4a6B1AVK5 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Col4a6B1AVK5 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col4a6B1AVK5 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Col4a6B1AVK5 Zbtb34-201ENSMUST00000091037 6510 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col4a6B1AVK5 AC153959.1-201ENSMUST00000213617 1694 ntBASIC6.95□□□□□ -1.3
Col4a6B1AVK5 4930471D02Rik-201ENSMUST00000180815 2075 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Col4a6B1AVK5 Erc2-205ENSMUST00000210135 6233 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Col4a6B1AVK5 Smco3-201ENSMUST00000068293 2056 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col4a6B1AVK5 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col4a6B1AVK5 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col4a6B1AVK5 Gm45537-201ENSMUST00000211539 2708 ntBASIC6.95□□□□□ -1.3
Col4a6B1AVK5 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Col4a6B1AVK5 Ncam1-204ENSMUST00000193547 6050 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col4a6B1AVK5 Dclk1-207ENSMUST00000198412 4282 ntTSL 5 BASIC6.94□□□□□ -1.3
Col4a6B1AVK5 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Col4a6B1AVK5 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Col4a6B1AVK5 Glod4-206ENSMUST00000169701 4203 ntTSL 2 BASIC6.94□□□□□ -1.3
Col4a6B1AVK5 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC6.94□□□□□ -1.3
Col4a6B1AVK5 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC6.94□□□□□ -1.3
Col4a6B1AVK5 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC6.94□□□□□ -1.3
Col4a6B1AVK5 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC6.94□□□□□ -1.3
Col4a6B1AVK5 Gm20778-201ENSMUST00000178524 627 ntBASIC6.94□□□□□ -1.3
Col4a6B1AVK5 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Col4a6B1AVK5 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Col4a6B1AVK5 Gm27960-201ENSMUST00000183445 184 ntBASIC6.94□□□□□ -1.3
Col4a6B1AVK5 Gm29197-201ENSMUST00000185922 702 ntBASIC6.94□□□□□ -1.3
Col4a6B1AVK5 Gm37689-201ENSMUST00000193139 275 ntBASIC6.94□□□□□ -1.3
Col4a6B1AVK5 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC6.94□□□□□ -1.3
Col4a6B1AVK5 Vmn1r199-203ENSMUST00000227689 5537 ntAPPRIS ALT2 BASIC6.94□□□□□ -1.3
Col4a6B1AVK5 AC154563.1-201ENSMUST00000228317 442 ntBASIC6.94□□□□□ -1.3
Col4a6B1AVK5 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col4a6B1AVK5 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
Col4a6B1AVK5 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col4a6B1AVK5 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC6.94□□□□□ -1.3
Col4a6B1AVK5 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
Col4a6B1AVK5 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col4a6B1AVK5 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col4a6B1AVK5 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Col4a6B1AVK5 Med12-202ENSMUST00000087956 6746 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Col4a6B1AVK5 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Col4a6B1AVK5 Bmx-202ENSMUST00000112265 3005 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col4a6B1AVK5 Efl1-205ENSMUST00000179489 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col4a6B1AVK5 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC6.94□□□□□ -1.3
Col4a6B1AVK5 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col4a6B1AVK5 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col4a6B1AVK5 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Col4a6B1AVK5 D030047H15Rik-201ENSMUST00000148318 2536 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Col4a6B1AVK5 Ikbkg-217ENSMUST00000164101 6788 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Col4a6B1AVK5 Ikbkg-218ENSMUST00000180230 6785 ntAPPRIS P3 TSL 5 BASIC6.94□□□□□ -1.3
Col4a6B1AVK5 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col4a6B1AVK5 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
Col4a6B1AVK5 Star-201ENSMUST00000033979 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col4a6B1AVK5 Gm11242-201ENSMUST00000120103 2457 ntBASIC6.94□□□□□ -1.3
Col4a6B1AVK5 Ctnnd1-218ENSMUST00000111692 6170 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
Col4a6B1AVK5 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col4a6B1AVK5 Slc7a2-204ENSMUST00000118432 3681 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Col4a6B1AVK5 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Col4a6B1AVK5 Gm8692-201ENSMUST00000118102 438 ntBASIC6.93□□□□□ -1.3
Col4a6B1AVK5 Gm12442-201ENSMUST00000118372 338 ntBASIC6.93□□□□□ -1.3
Col4a6B1AVK5 Gm15959-201ENSMUST00000121724 368 ntBASIC6.93□□□□□ -1.3
Col4a6B1AVK5 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Col4a6B1AVK5 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC6.93□□□□□ -1.3
Col4a6B1AVK5 Gm25363-201ENSMUST00000158850 245 ntBASIC6.93□□□□□ -1.3
Col4a6B1AVK5 Gm16164-201ENSMUST00000160078 468 ntBASIC6.93□□□□□ -1.3
Col4a6B1AVK5 Gm23632-201ENSMUST00000175289 125 ntBASIC6.93□□□□□ -1.3
Col4a6B1AVK5 Mir3097-201ENSMUST00000175356 67 ntBASIC6.93□□□□□ -1.3
Col4a6B1AVK5 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC6.93□□□□□ -1.3
Col4a6B1AVK5 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC6.93□□□□□ -1.3
Col4a6B1AVK5 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC6.93□□□□□ -1.3
Col4a6B1AVK5 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC6.93□□□□□ -1.3
Col4a6B1AVK5 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC6.93□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms