Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm16511-201ENSMUST00000120019 564 ntBASIC5.76□□□□□ -1.49
Col6a4A2AX52 Gm6451-201ENSMUST00000121488 717 ntBASIC5.76□□□□□ -1.49
Col6a4A2AX52 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a4A2AX52 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a4A2AX52 Gm24176-201ENSMUST00000158928 121 ntBASIC5.76□□□□□ -1.49
Col6a4A2AX52 Gm7745-201ENSMUST00000182235 973 ntBASIC5.76□□□□□ -1.49
Col6a4A2AX52 Gm27348-201ENSMUST00000184511 170 ntBASIC5.76□□□□□ -1.49
Col6a4A2AX52 Gm5260-201ENSMUST00000186157 949 ntBASIC5.76□□□□□ -1.49
Col6a4A2AX52 Gm21524-201ENSMUST00000190499 696 ntBASIC5.76□□□□□ -1.49
Col6a4A2AX52 Gm21715-201ENSMUST00000191056 694 ntBASIC5.76□□□□□ -1.49
Col6a4A2AX52 Gm19185-201ENSMUST00000196365 643 ntBASIC5.76□□□□□ -1.49
Col6a4A2AX52 Gm42753-201ENSMUST00000196718 1268 ntBASIC5.76□□□□□ -1.49
Col6a4A2AX52 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC5.76□□□□□ -1.49
Col6a4A2AX52 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC5.76□□□□□ -1.49
Col6a4A2AX52 AC132587.1-201ENSMUST00000220562 166 ntBASIC5.76□□□□□ -1.49
Col6a4A2AX52 AL669819.1-201ENSMUST00000225143 330 ntBASIC5.76□□□□□ -1.49
Col6a4A2AX52 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC5.76□□□□□ -1.49
Col6a4A2AX52 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC5.76□□□□□ -1.49
Col6a4A2AX52 Gm37906-201ENSMUST00000192050 3035 ntBASIC5.76□□□□□ -1.49
Col6a4A2AX52 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a4A2AX52 Gm44101-201ENSMUST00000203951 2221 ntBASIC5.76□□□□□ -1.49
Col6a4A2AX52 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a4A2AX52 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Col6a4A2AX52 Gm15229-201ENSMUST00000146636 1398 ntBASIC5.76□□□□□ -1.49
Col6a4A2AX52 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a4A2AX52 Gm37548-201ENSMUST00000194519 3814 ntBASIC5.76□□□□□ -1.49
Col6a4A2AX52 Gria3-201ENSMUST00000076349 5192 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a4A2AX52 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a4A2AX52 Gm6493-201ENSMUST00000159889 1786 ntBASIC5.76□□□□□ -1.49
Col6a4A2AX52 Gm3138-201ENSMUST00000165431 1760 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Col6a4A2AX52 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC5.75□□□□□ -1.49
Col6a4A2AX52 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a4A2AX52 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a4A2AX52 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a4A2AX52 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Col6a4A2AX52 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Col6a4A2AX52 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a4A2AX52 Dgkh-206ENSMUST00000228362 3308 ntBASIC5.75□□□□□ -1.49
Col6a4A2AX52 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a4A2AX52 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Col6a4A2AX52 Nt5dc1-203ENSMUST00000105512 2727 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a4A2AX52 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Col6a4A2AX52 Gm11256-201ENSMUST00000118109 829 ntBASIC5.75□□□□□ -1.49
Col6a4A2AX52 Gm15078-201ENSMUST00000118371 782 ntBASIC5.75□□□□□ -1.49
Col6a4A2AX52 Gm7212-201ENSMUST00000120817 348 ntBASIC5.75□□□□□ -1.49
Col6a4A2AX52 Rps29-ps-201ENSMUST00000122083 172 ntBASIC5.75□□□□□ -1.49
Col6a4A2AX52 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a4A2AX52 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC5.75□□□□□ -1.49
Col6a4A2AX52 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a4A2AX52 Gm26346-201ENSMUST00000157525 329 ntBASIC5.75□□□□□ -1.49
Col6a4A2AX52 Gm26323-201ENSMUST00000157743 175 ntBASIC5.75□□□□□ -1.49
Col6a4A2AX52 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC5.75□□□□□ -1.49
Col6a4A2AX52 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a4A2AX52 Gm43141-201ENSMUST00000199695 274 ntBASIC5.75□□□□□ -1.49
Col6a4A2AX52 AL591207.2-201ENSMUST00000222991 337 ntBASIC5.75□□□□□ -1.49
Col6a4A2AX52 AC165155.1-201ENSMUST00000228932 445 ntBASIC5.75□□□□□ -1.49
Col6a4A2AX52 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a4A2AX52 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Col6a4A2AX52 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a4A2AX52 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC5.75□□□□□ -1.49
Col6a4A2AX52 Pdgfd-201ENSMUST00000058692 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a4A2AX52 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a4A2AX52 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a4A2AX52 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a4A2AX52 Ofcc1-201ENSMUST00000054635 2816 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a4A2AX52 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a4A2AX52 Gm18305-201ENSMUST00000216532 2128 ntBASIC5.75□□□□□ -1.49
Col6a4A2AX52 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a4A2AX52 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
Col6a4A2AX52 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC5.75□□□□□ -1.49
Col6a4A2AX52 Gm43880-201ENSMUST00000203635 2162 ntBASIC5.75□□□□□ -1.49
Col6a4A2AX52 Gm37786-201ENSMUST00000191714 3225 ntBASIC5.75□□□□□ -1.49
Col6a4A2AX52 Grm8-203ENSMUST00000115324 3299 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a4A2AX52 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Col6a4A2AX52 Ect2l-204ENSMUST00000208948 2862 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Col6a4A2AX52 1700029M20Rik-203ENSMUST00000153347 2963 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a4A2AX52 Pkd1l1-203ENSMUST00000178195 6213 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Col6a4A2AX52 Olfr1346-202ENSMUST00000207658 4429 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Col6a4A2AX52 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a4A2AX52 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
Col6a4A2AX52 Gm12319-201ENSMUST00000131642 357 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a4A2AX52 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a4A2AX52 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC5.75□□□□□ -1.49
Col6a4A2AX52 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC5.75□□□□□ -1.49
Col6a4A2AX52 Gm43846-201ENSMUST00000200502 932 ntBASIC5.75□□□□□ -1.49
Col6a4A2AX52 Gm32983-201ENSMUST00000208500 505 ntBASIC5.75□□□□□ -1.49
Col6a4A2AX52 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC5.75□□□□□ -1.49
Col6a4A2AX52 CT025685.1-201ENSMUST00000213716 150 ntBASIC5.75□□□□□ -1.49
Col6a4A2AX52 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC5.75□□□□□ -1.49
Col6a4A2AX52 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC5.75□□□□□ -1.49
Col6a4A2AX52 Gm6056-201ENSMUST00000221253 488 ntBASIC5.75□□□□□ -1.49
Col6a4A2AX52 Gm5612-201ENSMUST00000053326 375 ntBASIC5.75□□□□□ -1.49
Col6a4A2AX52 Gm23456-201ENSMUST00000083335 137 ntBASIC5.75□□□□□ -1.49
Col6a4A2AX52 n-R5s58-201ENSMUST00000093682 119 ntBASIC5.75□□□□□ -1.49
Col6a4A2AX52 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC5.75□□□□□ -1.49
Col6a4A2AX52 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a4A2AX52 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a4A2AX52 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC5.75□□□□□ -1.49
Col6a4A2AX52 Olfr686-204ENSMUST00000216613 2613 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Col6a4A2AX52 Gm38009-201ENSMUST00000194884 3341 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms