Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Gm3550W4VSN7 Gm13416-201ENSMUST00000117264 1612 ntBASIC5.74□□□□□ -1.49
Gm3550W4VSN7 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Gm3550W4VSN7 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Gm3550W4VSN7 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Gm3550W4VSN7 AC162301.1-201ENSMUST00000228785 1542 ntBASIC5.74□□□□□ -1.49
Gm3550W4VSN7 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Gm3550W4VSN7 AC107452.3-201ENSMUST00000228807 1308 ntBASIC5.74□□□□□ -1.49
Gm3550W4VSN7 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Gm3550W4VSN7 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Gm3550W4VSN7 AC158605.3-201ENSMUST00000218999 2538 ntBASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Gm5361-201ENSMUST00000211041 1498 ntBASIC5.73□□□□□ -1.49
Gm3550W4VSN7 AC187103.1-201ENSMUST00000224641 1475 ntBASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Gm43775-201ENSMUST00000201019 3395 ntBASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Gm25546-201ENSMUST00000103977 132 ntBASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Gm4911-201ENSMUST00000119388 945 ntBASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Gm13900-201ENSMUST00000119402 498 ntBASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Gm15712-201ENSMUST00000120369 1156 ntBASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Gm13221-201ENSMUST00000121712 430 ntBASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Gm23392-201ENSMUST00000157580 113 ntBASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Gm16573-201ENSMUST00000160334 801 ntTSL 3 BASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Gm17205-201ENSMUST00000168370 1207 ntBASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Gm6061-201ENSMUST00000175860 492 ntBASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Gm27158-201ENSMUST00000183813 238 ntBASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC5.73□□□□□ -1.49
Gm3550W4VSN7 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Gm7943-201ENSMUST00000212078 1034 ntBASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC5.73□□□□□ -1.49
Gm3550W4VSN7 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC5.73□□□□□ -1.49
Gm3550W4VSN7 AC127242.3-201ENSMUST00000222009 580 ntBASIC5.73□□□□□ -1.49
Gm3550W4VSN7 AC165157.1-201ENSMUST00000222981 580 ntBASIC5.73□□□□□ -1.49
Gm3550W4VSN7 AC132590.1-201ENSMUST00000224374 1164 ntBASIC5.73□□□□□ -1.49
Gm3550W4VSN7 AC154806.5-204ENSMUST00000228900 867 ntBASIC5.73□□□□□ -1.49
Gm3550W4VSN7 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Gm3550W4VSN7 CT010577.1-202ENSMUST00000226187 1903 ntBASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Gm3550W4VSN7 AC158537.1-201ENSMUST00000224637 1711 ntBASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Gm20775-201ENSMUST00000100115 1851 ntBASIC5.73□□□□□ -1.49
Gm3550W4VSN7 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Gm3550W4VSN7 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Gm3550W4VSN7 Gm43606-201ENSMUST00000195938 3556 ntBASIC5.72□□□□□ -1.49
Gm3550W4VSN7 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC5.72□□□□□ -1.49
Gm3550W4VSN7 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Gm3550W4VSN7 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Gm3550W4VSN7 AC129308.2-203ENSMUST00000224109 2385 ntBASIC5.72□□□□□ -1.49
Gm3550W4VSN7 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
Gm3550W4VSN7 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Gm3550W4VSN7 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Gm3550W4VSN7 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Gm3550W4VSN7 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Gm3550W4VSN7 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Gm3550W4VSN7 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Gm3550W4VSN7 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC5.72□□□□□ -1.49
Gm3550W4VSN7 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Gm3550W4VSN7 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Gm3550W4VSN7 Ifna14-201ENSMUST00000102808 570 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Gm3550W4VSN7 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
Gm3550W4VSN7 Gm12635-201ENSMUST00000117285 752 ntBASIC5.72□□□□□ -1.49
Gm3550W4VSN7 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC5.72□□□□□ -1.49
Gm3550W4VSN7 Gm11581-201ENSMUST00000122024 763 ntBASIC5.72□□□□□ -1.49
Gm3550W4VSN7 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Gm3550W4VSN7 Gm17022-201ENSMUST00000166415 922 ntBASIC5.72□□□□□ -1.49
Gm3550W4VSN7 Mir5100-201ENSMUST00000174993 64 ntBASIC5.72□□□□□ -1.49
Gm3550W4VSN7 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC5.72□□□□□ -1.49
Gm3550W4VSN7 Gm24756-201ENSMUST00000177002 96 ntBASIC5.72□□□□□ -1.49
Gm3550W4VSN7 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Gm3550W4VSN7 Gm18848-201ENSMUST00000182069 792 ntBASIC5.72□□□□□ -1.49
Gm3550W4VSN7 Gm9167-201ENSMUST00000182469 962 ntBASIC5.72□□□□□ -1.49
Gm3550W4VSN7 Gm18875-201ENSMUST00000188563 882 ntBASIC5.72□□□□□ -1.49
Gm3550W4VSN7 Gm7412-201ENSMUST00000191692 605 ntBASIC5.72□□□□□ -1.49
Gm3550W4VSN7 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Gm3550W4VSN7 Gm6077-201ENSMUST00000196008 499 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms