Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Gm25093-201ENSMUST00000103993 132 ntBASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Gm25498-201ENSMUST00000104424 129 ntBASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Gm12713-201ENSMUST00000118404 764 ntBASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC6.39□□□□□ -1.39
Cdc40Q9DC48 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cdc40Q9DC48 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Gm16102-201ENSMUST00000160955 420 ntBASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Gm27014-201ENSMUST00000182658 937 ntBASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC6.39□□□□□ -1.39
Cdc40Q9DC48 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Gm37669-201ENSMUST00000192184 820 ntBASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Gm18752-201ENSMUST00000192876 608 ntBASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Gm30517-201ENSMUST00000197350 772 ntBASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Gm9240-201ENSMUST00000206527 742 ntBASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Gm45739-201ENSMUST00000213094 388 ntBASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC6.39□□□□□ -1.39
Cdc40Q9DC48 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Gm5119-201ENSMUST00000215858 634 ntBASIC6.39□□□□□ -1.39
Cdc40Q9DC48 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cdc40Q9DC48 AC163660.1-201ENSMUST00000223696 818 ntBASIC6.39□□□□□ -1.39
Cdc40Q9DC48 AC125405.2-201ENSMUST00000227862 383 ntBASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Snora21-201ENSMUST00000082967 137 ntBASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Cdc40Q9DC48 AC163660.4-201ENSMUST00000224983 2171 ntBASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cdc40Q9DC48 AC187103.1-201ENSMUST00000224641 1475 ntBASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Gm37138-201ENSMUST00000194564 2089 ntBASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Cdc40Q9DC48 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Gm38082-201ENSMUST00000192800 6882 ntBASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cdc40Q9DC48 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Mir697-201ENSMUST00000102316 109 ntBASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Gm26417-201ENSMUST00000104274 135 ntBASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Gm12939-201ENSMUST00000117303 165 ntBASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cdc40Q9DC48 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Gm14503-201ENSMUST00000130337 1164 ntBASIC6.38□□□□□ -1.39
Cdc40Q9DC48 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Gm3760-201ENSMUST00000167475 804 ntBASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Gm3585-201ENSMUST00000173438 875 ntBASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Gm8245-201ENSMUST00000182434 987 ntBASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Gm29357-201ENSMUST00000186877 698 ntBASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC6.38□□□□□ -1.39
Cdc40Q9DC48 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Gm23011-202ENSMUST00000197855 275 ntBASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Gm3511-201ENSMUST00000199823 204 ntBASIC6.38□□□□□ -1.39
Cdc40Q9DC48 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC6.38□□□□□ -1.39
Cdc40Q9DC48 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC6.38□□□□□ -1.39
Cdc40Q9DC48 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC6.38□□□□□ -1.39
Cdc40Q9DC48 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC6.38□□□□□ -1.39
Cdc40Q9DC48 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cdc40Q9DC48 AC151730.1-201ENSMUST00000226106 448 ntBASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC6.38□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 107.5 ms