Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 CT030705.2-201ENSMUST00000225301 556 ntBASIC6.73□□□□□ -1.33
Msh4Q99MT2 AC154324.1-201ENSMUST00000226711 814 ntBASIC6.73□□□□□ -1.33
Msh4Q99MT2 AC115304.1-202ENSMUST00000226850 837 ntBASIC6.73□□□□□ -1.33
Msh4Q99MT2 AC122397.3-201ENSMUST00000227097 527 ntBASIC6.73□□□□□ -1.33
Msh4Q99MT2 AC154730.1-201ENSMUST00000227874 816 ntBASIC6.73□□□□□ -1.33
Msh4Q99MT2 Mbnl2-203ENSMUST00000226800 3328 ntBASIC6.73□□□□□ -1.33
Msh4Q99MT2 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC6.73□□□□□ -1.33
Msh4Q99MT2 Gm20768-201ENSMUST00000199527 2338 ntBASIC6.73□□□□□ -1.33
Msh4Q99MT2 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC6.73□□□□□ -1.33
Msh4Q99MT2 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Msh4Q99MT2 Gm26575-201ENSMUST00000181714 2232 ntBASIC6.73□□□□□ -1.33
Msh4Q99MT2 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Msh4Q99MT2 AC138765.2-202ENSMUST00000228418 3435 ntBASIC6.73□□□□□ -1.33
Msh4Q99MT2 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Msh4Q99MT2 Gm10307-201ENSMUST00000189839 1337 ntBASIC6.73□□□□□ -1.33
Msh4Q99MT2 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Msh4Q99MT2 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Msh4Q99MT2 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC6.73□□□□□ -1.33
Msh4Q99MT2 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Msh4Q99MT2 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Msh4Q99MT2 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Msh4Q99MT2 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
Msh4Q99MT2 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC6.72□□□□□ -1.33
Msh4Q99MT2 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Msh4Q99MT2 AC139758.3-201ENSMUST00000226853 2704 ntBASIC6.72□□□□□ -1.33
Msh4Q99MT2 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Msh4Q99MT2 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Msh4Q99MT2 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Msh4Q99MT2 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
Msh4Q99MT2 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Msh4Q99MT2 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Msh4Q99MT2 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Msh4Q99MT2 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Msh4Q99MT2 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Msh4Q99MT2 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Msh4Q99MT2 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Msh4Q99MT2 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Msh4Q99MT2 Gm26416-201ENSMUST00000104280 134 ntBASIC6.72□□□□□ -1.33
Msh4Q99MT2 Gm25379-201ENSMUST00000104338 114 ntBASIC6.72□□□□□ -1.33
Msh4Q99MT2 Gm13137-201ENSMUST00000118035 345 ntBASIC6.72□□□□□ -1.33
Msh4Q99MT2 Gm11903-201ENSMUST00000118958 727 ntBASIC6.72□□□□□ -1.33
Msh4Q99MT2 Gm13735-201ENSMUST00000120217 670 ntBASIC6.72□□□□□ -1.33
Msh4Q99MT2 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC6.72□□□□□ -1.33
Msh4Q99MT2 Gm13221-201ENSMUST00000121712 430 ntBASIC6.72□□□□□ -1.33
Msh4Q99MT2 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Msh4Q99MT2 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Msh4Q99MT2 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Msh4Q99MT2 Gm25281-201ENSMUST00000157270 104 ntBASIC6.72□□□□□ -1.33
Msh4Q99MT2 Gm27185-201ENSMUST00000184296 247 ntBASIC6.72□□□□□ -1.33
Msh4Q99MT2 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC6.72□□□□□ -1.33
Msh4Q99MT2 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC6.72□□□□□ -1.33
Msh4Q99MT2 Ighv6-2-201ENSMUST00000192430 295 ntBASIC6.72□□□□□ -1.33
Msh4Q99MT2 Gm18752-201ENSMUST00000192876 608 ntBASIC6.72□□□□□ -1.33
Msh4Q99MT2 Gm24826-202ENSMUST00000197298 216 ntBASIC6.72□□□□□ -1.33
Msh4Q99MT2 Gm23011-202ENSMUST00000197855 275 ntBASIC6.72□□□□□ -1.33
Msh4Q99MT2 Gm43656-201ENSMUST00000197882 434 ntBASIC6.72□□□□□ -1.33
Msh4Q99MT2 Gm42983-201ENSMUST00000199879 815 ntBASIC6.72□□□□□ -1.33
Msh4Q99MT2 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Msh4Q99MT2 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Msh4Q99MT2 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC6.72□□□□□ -1.33
Msh4Q99MT2 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC6.72□□□□□ -1.33
Msh4Q99MT2 AC121804.1-201ENSMUST00000221016 394 ntBASIC6.72□□□□□ -1.33
Msh4Q99MT2 Gm9472-201ENSMUST00000221625 526 ntBASIC6.72□□□□□ -1.33
Msh4Q99MT2 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC6.72□□□□□ -1.33
Msh4Q99MT2 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC6.72□□□□□ -1.33
Msh4Q99MT2 AC108947.1-201ENSMUST00000224274 1000 ntBASIC6.72□□□□□ -1.33
Msh4Q99MT2 AC187103.4-201ENSMUST00000225399 300 ntBASIC6.72□□□□□ -1.33
Msh4Q99MT2 Vmn1r41-202ENSMUST00000226337 888 ntBASIC6.72□□□□□ -1.33
Msh4Q99MT2 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC6.72□□□□□ -1.33
Msh4Q99MT2 AC135292.2-201ENSMUST00000227559 367 ntBASIC6.72□□□□□ -1.33
Msh4Q99MT2 AC151902.1-201ENSMUST00000227800 375 ntBASIC6.72□□□□□ -1.33
Msh4Q99MT2 AC115735.5-201ENSMUST00000228386 397 ntBASIC6.72□□□□□ -1.33
Msh4Q99MT2 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Msh4Q99MT2 Gm9800-201ENSMUST00000052615 336 ntBASIC6.72□□□□□ -1.33
Msh4Q99MT2 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Msh4Q99MT2 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Msh4Q99MT2 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Msh4Q99MT2 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Msh4Q99MT2 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Msh4Q99MT2 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Msh4Q99MT2 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Msh4Q99MT2 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Msh4Q99MT2 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Msh4Q99MT2 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Msh4Q99MT2 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Msh4Q99MT2 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Msh4Q99MT2 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Msh4Q99MT2 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Msh4Q99MT2 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Msh4Q99MT2 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Msh4Q99MT2 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Msh4Q99MT2 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Msh4Q99MT2 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Msh4Q99MT2 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Msh4Q99MT2 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC6.71□□□□□ -1.33
Msh4Q99MT2 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.33
Msh4Q99MT2 AC122346.1-201ENSMUST00000225266 3732 ntBASIC6.71□□□□□ -1.33
Msh4Q99MT2 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Msh4Q99MT2 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC6.71□□□□□ -1.34
Msh4Q99MT2 Gm26419-201ENSMUST00000104272 133 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 107.7 ms