Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm37535-201ENSMUST00000194442 2365 ntBASIC8.04□□□□□ -1.12
Nup88Q8CEC0 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Nup88Q8CEC0 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Nup88Q8CEC0 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Nup88Q8CEC0 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC8.04□□□□□ -1.12
Nup88Q8CEC0 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC8.04□□□□□ -1.12
Nup88Q8CEC0 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Gm6327-201ENSMUST00000171185 1335 ntBASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Gm10307-201ENSMUST00000189839 1337 ntBASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Gm44763-201ENSMUST00000208287 2019 ntBASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Gm44661-201ENSMUST00000208830 3503 ntBASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Amy2b-201ENSMUST00000120184 1577 ntBASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Gm25093-201ENSMUST00000103993 132 ntBASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Gm14863-201ENSMUST00000119648 307 ntBASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Gm15081-201ENSMUST00000119794 844 ntBASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Gm11796-201ENSMUST00000120208 972 ntBASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Gm11257-201ENSMUST00000121313 315 ntBASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Mir1907-201ENSMUST00000122509 90 ntBASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Gm2975-201ENSMUST00000209710 820 ntBASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Nup88Q8CEC0 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Nup88Q8CEC0 AC153729.1-201ENSMUST00000214055 2562 ntBASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC8.03□□□□□ -1.12
Nup88Q8CEC0 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.12
Nup88Q8CEC0 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm38218-201ENSMUST00000193555 4689 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm43187-201ENSMUST00000200652 2397 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Nup88Q8CEC0 AC159196.3-201ENSMUST00000224307 1841 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm13196-201ENSMUST00000118297 379 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm12740-201ENSMUST00000118794 308 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm5843-201ENSMUST00000121631 476 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC8.02□□□□□ -1.13
Nup88Q8CEC0 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm29048-201ENSMUST00000185342 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm29403-201ENSMUST00000185491 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm28234-201ENSMUST00000185657 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm28248-201ENSMUST00000186093 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm29633-202ENSMUST00000186217 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm28829-201ENSMUST00000186231 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm28261-201ENSMUST00000186417 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm28815-201ENSMUST00000186751 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm28608-201ENSMUST00000186860 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm28122-201ENSMUST00000187088 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm28420-201ENSMUST00000187340 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm28106-201ENSMUST00000187640 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm28698-201ENSMUST00000187734 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm29224-201ENSMUST00000187965 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm29189-201ENSMUST00000188018 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm29476-201ENSMUST00000188397 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm29505-201ENSMUST00000188424 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm28125-201ENSMUST00000188470 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm29391-201ENSMUST00000188545 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm29280-201ENSMUST00000188571 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm28349-201ENSMUST00000188590 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm29652-201ENSMUST00000188622 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm28819-206ENSMUST00000188816 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm29079-201ENSMUST00000188875 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm28213-201ENSMUST00000189183 615 ntBASIC8.02□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms