Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 AC167019.4-201ENSMUST00000226494 1070 ntBASIC8.09□□□□□ -1.11
Pcdhb7Q8CDY9 AC140209.1-204ENSMUST00000226736 739 ntBASIC8.09□□□□□ -1.11
Pcdhb7Q8CDY9 Gm14267-208ENSMUST00000228324 1189 ntBASIC8.09□□□□□ -1.11
Pcdhb7Q8CDY9 Glycam1-201ENSMUST00000023134 628 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdhb7Q8CDY9 Rasgrf1-201ENSMUST00000034909 853 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdhb7Q8CDY9 Ubd-201ENSMUST00000038844 931 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdhb7Q8CDY9 Olfr1388-201ENSMUST00000055584 936 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Pcdhb7Q8CDY9 Fcgr4-201ENSMUST00000078825 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdhb7Q8CDY9 Olfr1418-201ENSMUST00000079875 1072 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Pcdhb7Q8CDY9 Gm10490-201ENSMUST00000086274 360 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Pcdhb7Q8CDY9 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdhb7Q8CDY9 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Pcdhb7Q8CDY9 Olfr1320-201ENSMUST00000096449 960 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Pcdhb7Q8CDY9 Neurod1-201ENSMUST00000041099 2729 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdhb7Q8CDY9 Gm37258-201ENSMUST00000191734 1627 ntBASIC8.09□□□□□ -1.11
Pcdhb7Q8CDY9 Slc3a1-201ENSMUST00000024944 2307 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdhb7Q8CDY9 Olfr1394-202ENSMUST00000216273 3024 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Pcdhb7Q8CDY9 2700046A07Rik-202ENSMUST00000067450 2101 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdhb7Q8CDY9 Pogz-201ENSMUST00000042402 4775 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdhb7Q8CDY9 3830406C13Rik-201ENSMUST00000112669 2477 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdhb7Q8CDY9 3830406C13Rik-202ENSMUST00000163392 2452 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdhb7Q8CDY9 Cnot2-204ENSMUST00000164088 2618 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdhb7Q8CDY9 Rfx3-204ENSMUST00000172907 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdhb7Q8CDY9 2610203C22Rik-204ENSMUST00000148585 3475 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdhb7Q8CDY9 Gm20110-201ENSMUST00000218263 2095 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdhb7Q8CDY9 Gm7754-201ENSMUST00000223075 2064 ntBASIC8.09□□□□□ -1.11
Pcdhb7Q8CDY9 Prr13-205ENSMUST00000171245 1353 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
Pcdhb7Q8CDY9 Asb17-201ENSMUST00000044089 2553 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
Pcdhb7Q8CDY9 Syne1-202ENSMUST00000095899 3443 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
Pcdhb7Q8CDY9 Nt5dc1-203ENSMUST00000105512 2727 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.12
Pcdhb7Q8CDY9 Eif4g2-213ENSMUST00000162415 7995 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Trim40-203ENSMUST00000172711 1539 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Itgb6-203ENSMUST00000112517 3537 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Xlr5c-202ENSMUST00000114503 1656 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Gm8734-201ENSMUST00000211669 1312 ntBASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Slamf9-201ENSMUST00000027830 1313 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Gm37663-201ENSMUST00000191887 2299 ntBASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Gcnt2-201ENSMUST00000067778 4038 ntAPPRIS P5 TSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Rgs4-202ENSMUST00000111357 2575 ntTSL 5 BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Tdgf1-201ENSMUST00000035075 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Aph1b-202ENSMUST00000113730 682 ntTSL 5 BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Gm14887-201ENSMUST00000119522 663 ntBASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Gm12307-201ENSMUST00000120581 590 ntBASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Gm14489-201ENSMUST00000120868 901 ntBASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Fam229b-203ENSMUST00000125042 707 ntTSL 5 BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 1700092C02Rik-201ENSMUST00000134397 359 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Cul1-203ENSMUST00000143941 530 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Gm20511-201ENSMUST00000174079 456 ntTSL 3 BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Gm20485-201ENSMUST00000174452 394 ntTSL 2 BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Gm23413-201ENSMUST00000175521 125 ntBASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Mir5623-201ENSMUST00000176631 70 ntBASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Gm3252-202ENSMUST00000178748 450 ntTSL 5 BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Gm19705-201ENSMUST00000180495 496 ntTSL 5 BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Mir7060-201ENSMUST00000183486 137 ntBASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Gm21013-201ENSMUST00000184952 1201 ntBASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Gm28266-201ENSMUST00000191410 439 ntBASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Gm37526-201ENSMUST00000194640 619 ntBASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Gm40040-201ENSMUST00000196123 504 ntTSL 3 BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Gm43007-201ENSMUST00000197618 291 ntBASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Mef2c-219ENSMUST00000198217 1257 ntTSL 5 BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Mef2c-225ENSMUST00000199210 1185 ntTSL 5 BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Gm44148-201ENSMUST00000203718 316 ntTSL 2 BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Gm8189-203ENSMUST00000211159 1225 ntBASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Gm45842-201ENSMUST00000211876 753 ntTSL 3 BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Tmem156-205ENSMUST00000212194 956 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 AC142407.1-201ENSMUST00000214371 494 ntTSL 5 BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Gm35558-202ENSMUST00000221819 499 ntBASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 AC165260.3-201ENSMUST00000225101 665 ntBASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Klk4-201ENSMUST00000007161 1249 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Olfr304-201ENSMUST00000077210 1002 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Ighv1-13-201ENSMUST00000095364 294 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Gm44750-201ENSMUST00000206185 2223 ntBASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Tmem177-201ENSMUST00000037906 3341 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Gm7682-202ENSMUST00000202916 1582 ntAPPRIS P5 TSL 5 BASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Gm45512-201ENSMUST00000210432 1553 ntBASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 AC131743.4-201ENSMUST00000221638 1553 ntBASIC8.08□□□□□ -1.12
Pcdhb7Q8CDY9 Rtp4-201ENSMUST00000038423 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms