Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Atg4aQ8C9S8 Gm6493-201ENSMUST00000159889 1786 ntBASIC8.17□□□□□ -1.1
Atg4aQ8C9S8 Gm10555-201ENSMUST00000193178 1791 ntBASIC8.17□□□□□ -1.1
Atg4aQ8C9S8 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Atg4aQ8C9S8 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Atg4aQ8C9S8 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC8.17□□□□□ -1.1
Atg4aQ8C9S8 Prex2-201ENSMUST00000027056 11053 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Atg4aQ8C9S8 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Atg4aQ8C9S8 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC8.17□□□□□ -1.1
Atg4aQ8C9S8 Gm15842-201ENSMUST00000120513 618 ntBASIC8.17□□□□□ -1.1
Atg4aQ8C9S8 Gm12778-201ENSMUST00000122341 333 ntBASIC8.17□□□□□ -1.1
Atg4aQ8C9S8 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC8.17□□□□□ -1.1
Atg4aQ8C9S8 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC8.17□□□□□ -1.1
Atg4aQ8C9S8 Gm22915-201ENSMUST00000157615 136 ntBASIC8.17□□□□□ -1.1
Atg4aQ8C9S8 Gm26381-201ENSMUST00000174895 92 ntBASIC8.17□□□□□ -1.1
Atg4aQ8C9S8 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Atg4aQ8C9S8 Ighv1-21-201ENSMUST00000194856 351 ntBASIC8.17□□□□□ -1.1
Atg4aQ8C9S8 Gm4860-201ENSMUST00000200368 454 ntBASIC8.17□□□□□ -1.1
Atg4aQ8C9S8 Gm43867-201ENSMUST00000203860 525 ntBASIC8.17□□□□□ -1.1
Atg4aQ8C9S8 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC8.17□□□□□ -1.1
Atg4aQ8C9S8 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC8.17□□□□□ -1.1
Atg4aQ8C9S8 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC8.17□□□□□ -1.1
Atg4aQ8C9S8 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC8.17□□□□□ -1.1
Atg4aQ8C9S8 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Atg4aQ8C9S8 n-R5s56-201ENSMUST00000082521 105 ntBASIC8.17□□□□□ -1.1
Atg4aQ8C9S8 Gm45657-201ENSMUST00000211318 1349 ntBASIC8.17□□□□□ -1.1
Atg4aQ8C9S8 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Atg4aQ8C9S8 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC8.17□□□□□ -1.1
Atg4aQ8C9S8 Gm37863-201ENSMUST00000194911 1457 ntBASIC8.17□□□□□ -1.1
Atg4aQ8C9S8 Erbin-203ENSMUST00000091269 6224 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Atg4aQ8C9S8 Gm10568-201ENSMUST00000193244 1634 ntBASIC8.17□□□□□ -1.1
Atg4aQ8C9S8 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Atg4aQ8C9S8 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Atg4aQ8C9S8 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC8.17□□□□□ -1.1
Atg4aQ8C9S8 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC8.17□□□□□ -1.1
Atg4aQ8C9S8 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Atg4aQ8C9S8 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
Atg4aQ8C9S8 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Atg4aQ8C9S8 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Atg4aQ8C9S8 Gm44194-201ENSMUST00000204222 3229 ntBASIC8.16□□□□□ -1.1
Atg4aQ8C9S8 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Atg4aQ8C9S8 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Atg4aQ8C9S8 CT025535.2-201ENSMUST00000228572 7441 ntBASIC8.16□□□□□ -1.1
Atg4aQ8C9S8 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Atg4aQ8C9S8 Gm13732-201ENSMUST00000117753 535 ntBASIC8.16□□□□□ -1.1
Atg4aQ8C9S8 Gm11501-201ENSMUST00000118039 581 ntBASIC8.16□□□□□ -1.1
Atg4aQ8C9S8 Gm15621-201ENSMUST00000119162 364 ntBASIC8.16□□□□□ -1.1
Atg4aQ8C9S8 Gm13207-201ENSMUST00000119862 773 ntBASIC8.16□□□□□ -1.1
Atg4aQ8C9S8 Gm11689-201ENSMUST00000120766 302 ntBASIC8.16□□□□□ -1.1
Atg4aQ8C9S8 Gm4886-201ENSMUST00000121874 1176 ntBASIC8.16□□□□□ -1.1
Atg4aQ8C9S8 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC8.16□□□□□ -1.1
Atg4aQ8C9S8 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC8.16□□□□□ -1.1
Atg4aQ8C9S8 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Atg4aQ8C9S8 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC8.16□□□□□ -1.1
Atg4aQ8C9S8 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Atg4aQ8C9S8 Gm23968-201ENSMUST00000175047 125 ntBASIC8.16□□□□□ -1.1
Atg4aQ8C9S8 Gm25617-201ENSMUST00000179548 133 ntBASIC8.16□□□□□ -1.1
Atg4aQ8C9S8 Gm5345-201ENSMUST00000183076 1014 ntBASIC8.16□□□□□ -1.1
Atg4aQ8C9S8 Gm27152-201ENSMUST00000183828 99 ntBASIC8.16□□□□□ -1.1
Atg4aQ8C9S8 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC8.16□□□□□ -1.1
Atg4aQ8C9S8 Gm25617-202ENSMUST00000198387 132 ntBASIC8.16□□□□□ -1.1
Atg4aQ8C9S8 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC8.16□□□□□ -1.1
Atg4aQ8C9S8 Gm43377-201ENSMUST00000201640 455 ntBASIC8.16□□□□□ -1.1
Atg4aQ8C9S8 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Atg4aQ8C9S8 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC8.16□□□□□ -1.1
Atg4aQ8C9S8 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC8.16□□□□□ -1.1
Atg4aQ8C9S8 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC8.16□□□□□ -1.1
Atg4aQ8C9S8 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC8.16□□□□□ -1.1
Atg4aQ8C9S8 AC154573.2-201ENSMUST00000224174 378 ntBASIC8.16□□□□□ -1.1
Atg4aQ8C9S8 AC151730.1-201ENSMUST00000226106 448 ntBASIC8.16□□□□□ -1.1
Atg4aQ8C9S8 AC131029.2-203ENSMUST00000228116 1244 ntBASIC8.16□□□□□ -1.1
Atg4aQ8C9S8 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Atg4aQ8C9S8 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Atg4aQ8C9S8 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC8.16□□□□□ -1.1
Atg4aQ8C9S8 Mir106b-201ENSMUST00000083580 82 ntBASIC8.16□□□□□ -1.1
Atg4aQ8C9S8 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Atg4aQ8C9S8 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Atg4aQ8C9S8 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Atg4aQ8C9S8 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Atg4aQ8C9S8 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Atg4aQ8C9S8 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Atg4aQ8C9S8 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC8.15□□□□□ -1.1
Atg4aQ8C9S8 Mbnl2-201ENSMUST00000088419 4552 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Atg4aQ8C9S8 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Atg4aQ8C9S8 Gm28112-201ENSMUST00000190898 1875 ntBASIC8.15□□□□□ -1.1
Atg4aQ8C9S8 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Atg4aQ8C9S8 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Atg4aQ8C9S8 CT009480.1-201ENSMUST00000225771 4480 ntBASIC8.15□□□□□ -1.1
Atg4aQ8C9S8 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Atg4aQ8C9S8 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC8.15□□□□□ -1.1
Atg4aQ8C9S8 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Atg4aQ8C9S8 Gm10773-201ENSMUST00000218071 3935 ntBASIC8.15□□□□□ -1.1
Atg4aQ8C9S8 Gm11318-201ENSMUST00000118640 961 ntBASIC8.15□□□□□ -1.1
Atg4aQ8C9S8 Gm12135-201ENSMUST00000119170 466 ntBASIC8.15□□□□□ -1.1
Atg4aQ8C9S8 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC8.15□□□□□ -1.1
Atg4aQ8C9S8 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Atg4aQ8C9S8 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Atg4aQ8C9S8 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Atg4aQ8C9S8 Gm23945-201ENSMUST00000179609 92 ntBASIC8.15□□□□□ -1.1
Atg4aQ8C9S8 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC8.15□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms