Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Gm42782-201ENSMUST00000197286 522 ntBASIC7.62□□□□□ -1.19
Usp49Q6P9L4 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Usp49Q6P9L4 Gm42883-201ENSMUST00000202594 222 ntBASIC7.62□□□□□ -1.19
Usp49Q6P9L4 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Usp49Q6P9L4 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC7.62□□□□□ -1.19
Usp49Q6P9L4 Gm18914-201ENSMUST00000214625 616 ntBASIC7.62□□□□□ -1.19
Usp49Q6P9L4 Olfr923-204ENSMUST00000219798 1068 ntBASIC7.62□□□□□ -1.19
Usp49Q6P9L4 CT009527.2-201ENSMUST00000225386 606 ntBASIC7.62□□□□□ -1.19
Usp49Q6P9L4 AC140288.1-201ENSMUST00000226329 503 ntBASIC7.62□□□□□ -1.19
Usp49Q6P9L4 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Usp49Q6P9L4 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Usp49Q6P9L4 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Usp49Q6P9L4 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Usp49Q6P9L4 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Usp49Q6P9L4 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Usp49Q6P9L4 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Usp49Q6P9L4 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Usp49Q6P9L4 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Usp49Q6P9L4 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Usp49Q6P9L4 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Usp49Q6P9L4 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Usp49Q6P9L4 Gm42478-201ENSMUST00000199252 1467 ntBASIC7.62□□□□□ -1.19
Usp49Q6P9L4 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Wdfy4-201ENSMUST00000061753 9681 ntAPPRIS P2 TSL 5 BASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Gm7690-201ENSMUST00000190885 1399 ntBASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Gm45876-201ENSMUST00000212698 2709 ntBASIC7.61□□□□□ -1.19
Usp49Q6P9L4 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Gm31049-201ENSMUST00000201516 1302 ntBASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Gm38366-201ENSMUST00000193127 1934 ntBASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Gm25760-201ENSMUST00000103989 132 ntBASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Gm12375-201ENSMUST00000119331 921 ntBASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Gm4911-201ENSMUST00000119388 945 ntBASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Gm13462-201ENSMUST00000121472 961 ntBASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Gm11581-201ENSMUST00000122024 763 ntBASIC7.61□□□□□ -1.19
Usp49Q6P9L4 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Gm16138-201ENSMUST00000159341 821 ntBASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Gm9672-201ENSMUST00000166437 425 ntBASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Gm2619-202ENSMUST00000166777 651 ntBASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Gm27507-201ENSMUST00000184199 93 ntBASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Gm37383-201ENSMUST00000191750 745 ntBASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Gm35323-201ENSMUST00000191836 499 ntBASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Igkv4-77-201ENSMUST00000199410 352 ntBASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Gm4042-201ENSMUST00000216946 637 ntBASIC7.61□□□□□ -1.19
Usp49Q6P9L4 AC154904.1-201ENSMUST00000219510 312 ntBASIC7.61□□□□□ -1.19
Usp49Q6P9L4 AC155270.1-202ENSMUST00000221503 352 ntBASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC7.61□□□□□ -1.19
Usp49Q6P9L4 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Gpr87-201ENSMUST00000056898 1080 ntBASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Usp49Q6P9L4 AC131747.2-201ENSMUST00000226121 1895 ntBASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Usp49Q6P9L4 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Gm44620-201ENSMUST00000209183 2887 ntBASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
Usp49Q6P9L4 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Usp49Q6P9L4 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Usp49Q6P9L4 Gm37902-201ENSMUST00000192839 1683 ntBASIC7.6□□□□□ -1.19
Usp49Q6P9L4 Prdm11-202ENSMUST00000111274 11678 ntTSL 5 BASIC7.6□□□□□ -1.19
Usp49Q6P9L4 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC7.6□□□□□ -1.19
Usp49Q6P9L4 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Usp49Q6P9L4 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Usp49Q6P9L4 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Usp49Q6P9L4 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Usp49Q6P9L4 Olfr510-202ENSMUST00000213979 2898 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Usp49Q6P9L4 Gm25311-201ENSMUST00000104136 132 ntBASIC7.6□□□□□ -1.19
Usp49Q6P9L4 Gm12400-201ENSMUST00000120915 1003 ntBASIC7.6□□□□□ -1.19
Usp49Q6P9L4 Gm14613-201ENSMUST00000122239 752 ntBASIC7.6□□□□□ -1.19
Usp49Q6P9L4 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC7.6□□□□□ -1.19
Usp49Q6P9L4 Gm27360-201ENSMUST00000183487 80 ntBASIC7.6□□□□□ -1.19
Usp49Q6P9L4 Gm29048-201ENSMUST00000185342 615 ntBASIC7.6□□□□□ -1.19
Usp49Q6P9L4 Gm29403-201ENSMUST00000185491 615 ntBASIC7.6□□□□□ -1.19
Usp49Q6P9L4 Gm28234-201ENSMUST00000185657 615 ntBASIC7.6□□□□□ -1.19
Usp49Q6P9L4 Gm28248-201ENSMUST00000186093 615 ntBASIC7.6□□□□□ -1.19
Usp49Q6P9L4 Gm29633-202ENSMUST00000186217 615 ntBASIC7.6□□□□□ -1.19
Usp49Q6P9L4 Gm28829-201ENSMUST00000186231 615 ntBASIC7.6□□□□□ -1.19
Usp49Q6P9L4 Gm28261-201ENSMUST00000186417 615 ntBASIC7.6□□□□□ -1.19
Usp49Q6P9L4 Gm28815-201ENSMUST00000186751 615 ntBASIC7.6□□□□□ -1.19
Usp49Q6P9L4 Gm28608-201ENSMUST00000186860 615 ntBASIC7.6□□□□□ -1.19
Usp49Q6P9L4 Gm28122-201ENSMUST00000187088 615 ntBASIC7.6□□□□□ -1.19
Usp49Q6P9L4 Gm28420-201ENSMUST00000187340 615 ntBASIC7.6□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms