Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Lars2-201ENSMUST00000038863 3894 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Sf3b2Q3UJB0 Gm44652-201ENSMUST00000208648 2854 ntBASIC9.06□□□□□ -0.96
Sf3b2Q3UJB0 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC9.06□□□□□ -0.96
Sf3b2Q3UJB0 Gm15502-201ENSMUST00000121449 208 ntBASIC9.06□□□□□ -0.96
Sf3b2Q3UJB0 Gm25550-201ENSMUST00000158079 128 ntBASIC9.06□□□□□ -0.96
Sf3b2Q3UJB0 Gm16139-201ENSMUST00000160015 420 ntBASIC9.06□□□□□ -0.96
Sf3b2Q3UJB0 Mir6986-201ENSMUST00000184483 58 ntBASIC9.06□□□□□ -0.96
Sf3b2Q3UJB0 Gm28455-201ENSMUST00000189105 1290 ntBASIC9.06□□□□□ -0.96
Sf3b2Q3UJB0 Gm43846-201ENSMUST00000200502 932 ntBASIC9.06□□□□□ -0.96
Sf3b2Q3UJB0 Gm7554-201ENSMUST00000202282 574 ntBASIC9.06□□□□□ -0.96
Sf3b2Q3UJB0 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Sf3b2Q3UJB0 Gm18600-201ENSMUST00000207205 505 ntBASIC9.06□□□□□ -0.96
Sf3b2Q3UJB0 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC9.06□□□□□ -0.96
Sf3b2Q3UJB0 CT025685.1-201ENSMUST00000213716 150 ntBASIC9.06□□□□□ -0.96
Sf3b2Q3UJB0 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC9.06□□□□□ -0.96
Sf3b2Q3UJB0 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC9.06□□□□□ -0.96
Sf3b2Q3UJB0 AC170810.1-201ENSMUST00000228267 672 ntBASIC9.06□□□□□ -0.96
Sf3b2Q3UJB0 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Sf3b2Q3UJB0 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Sf3b2Q3UJB0 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Sf3b2Q3UJB0 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Sf3b2Q3UJB0 Zfp37-201ENSMUST00000068822 3494 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Sf3b2Q3UJB0 Gm37077-201ENSMUST00000195723 3691 ntBASIC9.06□□□□□ -0.96
Sf3b2Q3UJB0 Ephx2-202ENSMUST00000224698 1985 ntBASIC9.06□□□□□ -0.96
Sf3b2Q3UJB0 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Sf3b2Q3UJB0 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Sf3b2Q3UJB0 Zfp488-201ENSMUST00000166737 4301 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Sf3b2Q3UJB0 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC9.05□□□□□ -0.96
Sf3b2Q3UJB0 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Sf3b2Q3UJB0 Arpp21-229ENSMUST00000164754 3310 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sf3b2Q3UJB0 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC9.05□□□□□ -0.96
Sf3b2Q3UJB0 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sf3b2Q3UJB0 Gm44117-201ENSMUST00000204442 1758 ntBASIC9.05□□□□□ -0.96
Sf3b2Q3UJB0 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Sf3b2Q3UJB0 Gm44165-201ENSMUST00000203093 1469 ntBASIC9.05□□□□□ -0.96
Sf3b2Q3UJB0 Gm16511-201ENSMUST00000120019 564 ntBASIC9.05□□□□□ -0.96
Sf3b2Q3UJB0 Gm11533-201ENSMUST00000120287 477 ntBASIC9.05□□□□□ -0.96
Sf3b2Q3UJB0 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC9.05□□□□□ -0.96
Sf3b2Q3UJB0 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Sf3b2Q3UJB0 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC9.05□□□□□ -0.96
Sf3b2Q3UJB0 Gm23539-201ENSMUST00000157537 224 ntBASIC9.05□□□□□ -0.96
Sf3b2Q3UJB0 Gm16112-201ENSMUST00000159075 382 ntBASIC9.05□□□□□ -0.96
Sf3b2Q3UJB0 Gm22917-201ENSMUST00000180116 110 ntBASIC9.05□□□□□ -0.96
Sf3b2Q3UJB0 Gm26509-201ENSMUST00000180947 948 ntBASIC9.05□□□□□ -0.96
Sf3b2Q3UJB0 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC9.05□□□□□ -0.96
Sf3b2Q3UJB0 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC9.05□□□□□ -0.96
Sf3b2Q3UJB0 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Sf3b2Q3UJB0 Gm35323-201ENSMUST00000191836 499 ntBASIC9.05□□□□□ -0.96
Sf3b2Q3UJB0 Gm43392-201ENSMUST00000196560 434 ntBASIC9.05□□□□□ -0.96
Sf3b2Q3UJB0 Gm10416-201ENSMUST00000197379 645 ntBASIC9.05□□□□□ -0.96
Sf3b2Q3UJB0 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC9.05□□□□□ -0.96
Sf3b2Q3UJB0 CT009742.1-201ENSMUST00000222507 702 ntBASIC9.05□□□□□ -0.96
Sf3b2Q3UJB0 AC125064.1-201ENSMUST00000225801 295 ntBASIC9.05□□□□□ -0.96
Sf3b2Q3UJB0 AC154718.1-201ENSMUST00000226676 250 ntBASIC9.05□□□□□ -0.96
Sf3b2Q3UJB0 AC113125.2-201ENSMUST00000226837 362 ntBASIC9.05□□□□□ -0.96
Sf3b2Q3UJB0 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sf3b2Q3UJB0 Ehbp1-207ENSMUST00000180360 4971 ntAPPRIS P3 TSL 5 BASIC9.05□□□□□ -0.96
Sf3b2Q3UJB0 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Sf3b2Q3UJB0 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Sf3b2Q3UJB0 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sf3b2Q3UJB0 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sf3b2Q3UJB0 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Sf3b2Q3UJB0 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC9.04□□□□□ -0.96
Sf3b2Q3UJB0 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Sf3b2Q3UJB0 Pnp-203ENSMUST00000048615 2942 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Sf3b2Q3UJB0 Gm26813-201ENSMUST00000180778 3587 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Sf3b2Q3UJB0 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Sf3b2Q3UJB0 Gm38315-201ENSMUST00000194286 2437 ntBASIC9.04□□□□□ -0.96
Sf3b2Q3UJB0 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Sf3b2Q3UJB0 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Sf3b2Q3UJB0 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Sf3b2Q3UJB0 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Sf3b2Q3UJB0 Atr-201ENSMUST00000034980 8056 ntTSL 5 BASIC9.04□□□□□ -0.96
Sf3b2Q3UJB0 Slc4a8-201ENSMUST00000023776 11790 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Sf3b2Q3UJB0 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Sf3b2Q3UJB0 Ttc41-203ENSMUST00000217747 1949 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Sf3b2Q3UJB0 Gm11443-201ENSMUST00000118790 479 ntBASIC9.04□□□□□ -0.96
Sf3b2Q3UJB0 Rps29-ps-201ENSMUST00000122083 172 ntBASIC9.04□□□□□ -0.96
Sf3b2Q3UJB0 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC9.04□□□□□ -0.96
Sf3b2Q3UJB0 Snora47-201ENSMUST00000157483 138 ntBASIC9.04□□□□□ -0.96
Sf3b2Q3UJB0 Gm6918-201ENSMUST00000167622 1222 ntBASIC9.04□□□□□ -0.96
Sf3b2Q3UJB0 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Sf3b2Q3UJB0 Ank3-208ENSMUST00000182029 3825 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Sf3b2Q3UJB0 Gm21301-201ENSMUST00000189476 699 ntBASIC9.04□□□□□ -0.96
Sf3b2Q3UJB0 Gm19185-201ENSMUST00000196365 643 ntBASIC9.04□□□□□ -0.96
Sf3b2Q3UJB0 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC9.04□□□□□ -0.96
Sf3b2Q3UJB0 Gm44943-201ENSMUST00000207254 300 ntBASIC9.04□□□□□ -0.96
Sf3b2Q3UJB0 Gm2774-201ENSMUST00000213650 1165 ntBASIC9.04□□□□□ -0.96
Sf3b2Q3UJB0 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Sf3b2Q3UJB0 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC9.04□□□□□ -0.96
Sf3b2Q3UJB0 AC164426.1-201ENSMUST00000225745 929 ntBASIC9.04□□□□□ -0.96
Sf3b2Q3UJB0 Gm24924-201ENSMUST00000084007 164 ntBASIC9.04□□□□□ -0.96
Sf3b2Q3UJB0 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Sf3b2Q3UJB0 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Sf3b2Q3UJB0 Chrna2-201ENSMUST00000022620 3554 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Sf3b2Q3UJB0 Gm14802-201ENSMUST00000121944 1885 ntBASIC9.04□□□□□ -0.96
Sf3b2Q3UJB0 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC9.04□□□□□ -0.96
Sf3b2Q3UJB0 Slx4ip-202ENSMUST00000099311 5089 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Sf3b2Q3UJB0 Impa1-201ENSMUST00000065938 4185 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Sf3b2Q3UJB0 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms