Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 Gm24473-201ENSMUST00000104483 131 ntBASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 Gm15129-201ENSMUST00000119673 279 ntBASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 Gm13486-201ENSMUST00000119910 282 ntBASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 Gm8215-201ENSMUST00000120627 990 ntBASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 Gm7746-201ENSMUST00000120966 503 ntBASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 Gm7420-201ENSMUST00000162836 842 ntBASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 Gm6726-201ENSMUST00000172786 681 ntBASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 Gm20637-201ENSMUST00000175715 462 ntBASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 Gm27684-201ENSMUST00000183778 80 ntBASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 Gm28580-201ENSMUST00000186767 88 ntBASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 Gm29383-201ENSMUST00000188284 480 ntBASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 Gm45509-201ENSMUST00000209624 1229 ntBASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 Gm18781-201ENSMUST00000211252 924 ntBASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 Gm31711-201ENSMUST00000220687 196 ntBASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 Gm10126-201ENSMUST00000221732 168 ntBASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 CT030705.2-201ENSMUST00000225301 556 ntBASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 AC157572.1-201ENSMUST00000227187 825 ntBASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trafd1Q3UDK1 Gm11342-203ENSMUST00000224879 1324 ntBASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Gm42597-201ENSMUST00000196663 1544 ntBASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Olfr531-204ENSMUST00000217167 3874 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Gm22707-201ENSMUST00000103834 110 ntBASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Gm13222-201ENSMUST00000119638 138 ntBASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Gm11581-201ENSMUST00000122024 763 ntBASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Gm16284-201ENSMUST00000140995 400 ntBASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Gm25717-201ENSMUST00000158631 353 ntBASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Mir6337-201ENSMUST00000184194 105 ntBASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Gm19185-201ENSMUST00000196365 643 ntBASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Igkv4-77-201ENSMUST00000199410 352 ntBASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Gm43928-201ENSMUST00000203737 409 ntBASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Gm6290-201ENSMUST00000207666 1158 ntBASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Gm2221-201ENSMUST00000209342 418 ntBASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Gm18914-201ENSMUST00000214625 616 ntBASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 AC151904.5-201ENSMUST00000218975 549 ntBASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Gm2139-201ENSMUST00000222569 1075 ntBASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 AC154380.1-201ENSMUST00000226804 720 ntBASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 AC091783.1-201ENSMUST00000223614 1613 ntBASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC6.76□□□□□ -1.33
Trafd1Q3UDK1 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Trafd1Q3UDK1 Gm37940-201ENSMUST00000194243 3251 ntBASIC6.75□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 101.1 ms