Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Nsa2-203ENSMUST00000225410 974 ntBASIC6.4□□□□□ -1.38
Col8a1Q00780 AC165437.1-201ENSMUST00000228640 536 ntBASIC6.4□□□□□ -1.38
Col8a1Q00780 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Col8a1Q00780 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Col8a1Q00780 Gm22864-201ENSMUST00000083950 130 ntBASIC6.4□□□□□ -1.38
Col8a1Q00780 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Col8a1Q00780 Osbpl6-203ENSMUST00000111930 3853 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Col8a1Q00780 Hsf2bp-201ENSMUST00000002145 2867 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Col8a1Q00780 Epha7-202ENSMUST00000080934 2880 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Col8a1Q00780 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.39
Col8a1Q00780 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Col8a1Q00780 2610203C22Rik-204ENSMUST00000148585 3475 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Col8a1Q00780 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
Col8a1Q00780 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Col8a1Q00780 Angpt2-201ENSMUST00000033846 3560 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Col8a1Q00780 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
Col8a1Q00780 Cep72-201ENSMUST00000036456 3641 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Col8a1Q00780 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC6.4□□□□□ -1.39
Col8a1Q00780 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC6.4□□□□□ -1.39
Col8a1Q00780 Gm5361-201ENSMUST00000211041 1498 ntBASIC6.4□□□□□ -1.39
Col8a1Q00780 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC6.4□□□□□ -1.39
Col8a1Q00780 Olfr212-201ENSMUST00000075756 2672 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Col8a1Q00780 Gm5583-201ENSMUST00000174328 1519 ntBASIC6.4□□□□□ -1.39
Col8a1Q00780 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Col8a1Q00780 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
Col8a1Q00780 Gm29612-201ENSMUST00000191490 2168 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Col8a1Q00780 Gm31152-201ENSMUST00000210319 2171 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Col8a1Q00780 Olfr1-201ENSMUST00000120303 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Col8a1Q00780 Bbs9-210ENSMUST00000147712 3495 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Col8a1Q00780 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col8a1Q00780 1700074P13Rik-201ENSMUST00000031935 1647 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col8a1Q00780 Muc13-202ENSMUST00000115044 2969 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col8a1Q00780 Gm36930-201ENSMUST00000195431 2376 ntBASIC6.39□□□□□ -1.39
Col8a1Q00780 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col8a1Q00780 Il5ra-201ENSMUST00000167925 1704 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Col8a1Q00780 Rnf213-203ENSMUST00000172235 2422 ntTSL 5 BASIC6.39□□□□□ -1.39
Col8a1Q00780 3830406C13Rik-201ENSMUST00000112669 2477 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col8a1Q00780 Gm45017-201ENSMUST00000206842 1777 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col8a1Q00780 AC140280.1-201ENSMUST00000227826 1847 ntBASIC6.39□□□□□ -1.39
Col8a1Q00780 Pgbd1-205ENSMUST00000151743 2642 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col8a1Q00780 Plscr2-201ENSMUST00000034932 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col8a1Q00780 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col8a1Q00780 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col8a1Q00780 4930546K05Rik-202ENSMUST00000216586 3539 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col8a1Q00780 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC6.39□□□□□ -1.39
Col8a1Q00780 Gm24142-201ENSMUST00000101960 107 ntBASIC6.39□□□□□ -1.39
Col8a1Q00780 Gm24048-201ENSMUST00000102411 106 ntBASIC6.39□□□□□ -1.39
Col8a1Q00780 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col8a1Q00780 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Col8a1Q00780 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC6.39□□□□□ -1.39
Col8a1Q00780 Gm13423-201ENSMUST00000117205 888 ntBASIC6.39□□□□□ -1.39
Col8a1Q00780 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC6.39□□□□□ -1.39
Col8a1Q00780 Gm14824-201ENSMUST00000119421 737 ntBASIC6.39□□□□□ -1.39
Col8a1Q00780 Gm13466-201ENSMUST00000121515 999 ntBASIC6.39□□□□□ -1.39
Col8a1Q00780 Gm23429-201ENSMUST00000122486 149 ntBASIC6.39□□□□□ -1.39
Col8a1Q00780 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col8a1Q00780 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC6.39□□□□□ -1.39
Col8a1Q00780 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col8a1Q00780 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC6.39□□□□□ -1.39
Col8a1Q00780 Gm6004-201ENSMUST00000173237 1116 ntBASIC6.39□□□□□ -1.39
Col8a1Q00780 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col8a1Q00780 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC6.39□□□□□ -1.39
Col8a1Q00780 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col8a1Q00780 Gm29290-201ENSMUST00000185385 597 ntTSL 3 BASIC6.39□□□□□ -1.39
Col8a1Q00780 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC6.39□□□□□ -1.39
Col8a1Q00780 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC6.39□□□□□ -1.39
Col8a1Q00780 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col8a1Q00780 Gm28266-201ENSMUST00000191410 439 ntBASIC6.39□□□□□ -1.39
Col8a1Q00780 Gm37260-201ENSMUST00000193748 1251 ntBASIC6.39□□□□□ -1.39
Col8a1Q00780 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC6.39□□□□□ -1.39
Col8a1Q00780 Gm43116-201ENSMUST00000199789 195 ntBASIC6.39□□□□□ -1.39
Col8a1Q00780 Gm7663-201ENSMUST00000201151 1240 ntBASIC6.39□□□□□ -1.39
Col8a1Q00780 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col8a1Q00780 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col8a1Q00780 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC6.39□□□□□ -1.39
Col8a1Q00780 AL603630.1-201ENSMUST00000214781 147 ntBASIC6.39□□□□□ -1.39
Col8a1Q00780 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Col8a1Q00780 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC6.39□□□□□ -1.39
Col8a1Q00780 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC6.39□□□□□ -1.39
Col8a1Q00780 Gm35035-201ENSMUST00000218838 628 ntTSL 3 BASIC6.39□□□□□ -1.39
Col8a1Q00780 AC144783.1-201ENSMUST00000219103 960 ntBASIC6.39□□□□□ -1.39
Col8a1Q00780 Gm19073-201ENSMUST00000219978 555 ntBASIC6.39□□□□□ -1.39
Col8a1Q00780 CT030254.3-201ENSMUST00000225959 1231 ntBASIC6.39□□□□□ -1.39
Col8a1Q00780 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Col8a1Q00780 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col8a1Q00780 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col8a1Q00780 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Col8a1Q00780 Gm6820-201ENSMUST00000188803 2173 ntBASIC6.39□□□□□ -1.39
Col8a1Q00780 Zfp280d-217ENSMUST00000184517 3919 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col8a1Q00780 Npy2r-203ENSMUST00000182181 1331 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col8a1Q00780 Gm10307-201ENSMUST00000189839 1337 ntBASIC6.39□□□□□ -1.39
Col8a1Q00780 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC6.39□□□□□ -1.39
Col8a1Q00780 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col8a1Q00780 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
Col8a1Q00780 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col8a1Q00780 Gm6300-201ENSMUST00000192393 1498 ntBASIC6.39□□□□□ -1.39
Col8a1Q00780 B130021K23Rik-201ENSMUST00000205226 2593 ntBASIC6.39□□□□□ -1.39
Col8a1Q00780 9930024M15Rik-201ENSMUST00000214902 2584 ntBASIC6.39□□□□□ -1.39
Col8a1Q00780 Ptk6-201ENSMUST00000016511 3689 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col8a1Q00780 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms