Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 AC156645.1-201ENSMUST00000223066 5194 ntBASIC10.39□□□□□ -0.75
Cux1P53564 Zfhx3-201ENSMUST00000043896 16433 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cux1P53564 Cd300a-201ENSMUST00000045151 4633 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cux1P53564 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cux1P53564 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Cux1P53564 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cux1P53564 AC163660.4-201ENSMUST00000224983 2171 ntBASIC10.39□□□□□ -0.75
Cux1P53564 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cux1P53564 Bmx-202ENSMUST00000112265 3005 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cux1P53564 Gm43679-201ENSMUST00000197051 3677 ntBASIC10.38□□□□□ -0.75
Cux1P53564 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Cux1P53564 Gm7189-201ENSMUST00000119811 429 ntBASIC10.38□□□□□ -0.75
Cux1P53564 Gm11533-201ENSMUST00000120287 477 ntBASIC10.38□□□□□ -0.75
Cux1P53564 Gm6446-201ENSMUST00000120604 818 ntBASIC10.38□□□□□ -0.75
Cux1P53564 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
Cux1P53564 Gm25387-201ENSMUST00000157813 132 ntBASIC10.38□□□□□ -0.75
Cux1P53564 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC10.38□□□□□ -0.75
Cux1P53564 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC10.38□□□□□ -0.75
Cux1P53564 Gm27030-201ENSMUST00000182551 464 ntBASIC10.38□□□□□ -0.75
Cux1P53564 Gm3351-201ENSMUST00000193454 505 ntBASIC10.38□□□□□ -0.75
Cux1P53564 Gm37072-201ENSMUST00000194570 837 ntBASIC10.38□□□□□ -0.75
Cux1P53564 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Cux1P53564 Gm44111-201ENSMUST00000204649 399 ntBASIC10.38□□□□□ -0.75
Cux1P53564 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Cux1P53564 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Cux1P53564 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC10.38□□□□□ -0.75
Cux1P53564 AC158986.1-201ENSMUST00000228391 3455 ntBASIC10.38□□□□□ -0.75
Cux1P53564 Plch1-201ENSMUST00000048134 6259 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cux1P53564 C130071C03Rik-201ENSMUST00000131907 3590 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Cux1P53564 Gm12919-201ENSMUST00000119855 1594 ntBASIC10.38□□□□□ -0.75
Cux1P53564 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC10.38□□□□□ -0.75
Cux1P53564 Gm44652-201ENSMUST00000208648 2854 ntBASIC10.38□□□□□ -0.75
Cux1P53564 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Cux1P53564 Ankrd6-203ENSMUST00000084749 4573 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Cux1P53564 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Cux1P53564 Gm42679-201ENSMUST00000197086 2906 ntBASIC10.38□□□□□ -0.75
Cux1P53564 Lca5-201ENSMUST00000034791 4160 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cux1P53564 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cux1P53564 Cdip1-201ENSMUST00000004173 3953 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cux1P53564 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cux1P53564 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Cux1P53564 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC10.38□□□□□ -0.75
Cux1P53564 Gm45017-201ENSMUST00000206842 1777 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Cux1P53564 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC10.38□□□□□ -0.75
Cux1P53564 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Cux1P53564 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Cux1P53564 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC10.38□□□□□ -0.75
Cux1P53564 Gm8837-201ENSMUST00000161037 1107 ntBASIC10.38□□□□□ -0.75
Cux1P53564 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Cux1P53564 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC10.38□□□□□ -0.75
Cux1P53564 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC10.38□□□□□ -0.75
Cux1P53564 Gm26455-201ENSMUST00000175300 92 ntBASIC10.38□□□□□ -0.75
Cux1P53564 Gm21846-201ENSMUST00000179257 3073 ntBASIC10.38□□□□□ -0.75
Cux1P53564 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Cux1P53564 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Cux1P53564 Gm37689-201ENSMUST00000193139 275 ntBASIC10.38□□□□□ -0.75
Cux1P53564 Gm44361-201ENSMUST00000197960 94 ntBASIC10.38□□□□□ -0.75
Cux1P53564 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Cux1P53564 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cux1P53564 AC156025.3-201ENSMUST00000225919 3095 ntBASIC10.38□□□□□ -0.75
Cux1P53564 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cux1P53564 Cdh23-203ENSMUST00000105462 10592 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Cux1P53564 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cux1P53564 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cux1P53564 Pax6-208ENSMUST00000111088 4427 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cux1P53564 Ssr1-201ENSMUST00000021864 9333 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cux1P53564 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
Cux1P53564 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cux1P53564 Sipa1l1-201ENSMUST00000053969 7488 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
Cux1P53564 Gm37924-201ENSMUST00000195470 3647 ntBASIC10.37□□□□□ -0.75
Cux1P53564 Gm23739-201ENSMUST00000102295 108 ntBASIC10.37□□□□□ -0.75
Cux1P53564 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC10.37□□□□□ -0.75
Cux1P53564 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cux1P53564 Gm22548-201ENSMUST00000174899 78 ntBASIC10.37□□□□□ -0.75
Cux1P53564 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Cux1P53564 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cux1P53564 Gm43354-201ENSMUST00000196862 346 ntBASIC10.37□□□□□ -0.75
Cux1P53564 Gm18839-201ENSMUST00000204292 670 ntBASIC10.37□□□□□ -0.75
Cux1P53564 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
Cux1P53564 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC10.37□□□□□ -0.75
Cux1P53564 Gm18103-201ENSMUST00000216621 779 ntBASIC10.37□□□□□ -0.75
Cux1P53564 AC154431.2-201ENSMUST00000225215 1055 ntBASIC10.37□□□□□ -0.75
Cux1P53564 Gm25133-201ENSMUST00000082647 130 ntBASIC10.37□□□□□ -0.75
Cux1P53564 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC10.37□□□□□ -0.75
Cux1P53564 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cux1P53564 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cux1P53564 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Cux1P53564 Gm15903-202ENSMUST00000199631 3518 ntBASIC10.36□□□□□ -0.75
Cux1P53564 Gm12608-201ENSMUST00000122013 1715 ntBASIC10.36□□□□□ -0.75
Cux1P53564 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cux1P53564 Sema5a-201ENSMUST00000067458 10809 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cux1P53564 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC10.36□□□□□ -0.75
Cux1P53564 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cux1P53564 Gm4853-201ENSMUST00000119359 394 ntBASIC10.36□□□□□ -0.75
Cux1P53564 Gm12262-201ENSMUST00000119915 305 ntBASIC10.36□□□□□ -0.75
Cux1P53564 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC10.36□□□□□ -0.75
Cux1P53564 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC10.36□□□□□ -0.75
Cux1P53564 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC10.36□□□□□ -0.75
Cux1P53564 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC10.36□□□□□ -0.75
Cux1P53564 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 106.8 ms