Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC7.38□□□□□ -1.23
Shmt1P50431 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC7.38□□□□□ -1.23
Shmt1P50431 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC7.38□□□□□ -1.23
Shmt1P50431 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Shmt1P50431 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Shmt1P50431 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Shmt1P50431 Gm3326-201ENSMUST00000164656 1043 ntBASIC7.38□□□□□ -1.23
Shmt1P50431 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Shmt1P50431 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC7.38□□□□□ -1.23
Shmt1P50431 Gm25574-201ENSMUST00000175245 249 ntBASIC7.38□□□□□ -1.23
Shmt1P50431 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Shmt1P50431 Gm2058-201ENSMUST00000178791 560 ntBASIC7.38□□□□□ -1.23
Shmt1P50431 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Shmt1P50431 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Shmt1P50431 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC7.38□□□□□ -1.23
Shmt1P50431 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Shmt1P50431 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Shmt1P50431 Gm37576-201ENSMUST00000194228 372 ntBASIC7.38□□□□□ -1.23
Shmt1P50431 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Shmt1P50431 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC7.38□□□□□ -1.23
Shmt1P50431 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC7.38□□□□□ -1.23
Shmt1P50431 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC7.38□□□□□ -1.23
Shmt1P50431 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC7.38□□□□□ -1.23
Shmt1P50431 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC7.38□□□□□ -1.23
Shmt1P50431 Gm9357-201ENSMUST00000207138 805 ntBASIC7.38□□□□□ -1.23
Shmt1P50431 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC7.38□□□□□ -1.23
Shmt1P50431 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Shmt1P50431 Gm18043-201ENSMUST00000216741 739 ntBASIC7.38□□□□□ -1.23
Shmt1P50431 AC153152.2-201ENSMUST00000223165 959 ntBASIC7.38□□□□□ -1.23
Shmt1P50431 AC158954.1-201ENSMUST00000228272 1006 ntBASIC7.38□□□□□ -1.23
Shmt1P50431 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Shmt1P50431 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC7.38□□□□□ -1.23
Shmt1P50431 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Shmt1P50431 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Shmt1P50431 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC7.38□□□□□ -1.23
Shmt1P50431 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Shmt1P50431 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC7.38□□□□□ -1.23
Shmt1P50431 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC7.38□□□□□ -1.23
Shmt1P50431 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC7.38□□□□□ -1.23
Shmt1P50431 Gm44797-201ENSMUST00000208780 1837 ntBASIC7.38□□□□□ -1.23
Shmt1P50431 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
Shmt1P50431 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Shmt1P50431 Gm9030-201ENSMUST00000218405 2410 ntBASIC7.38□□□□□ -1.23
Shmt1P50431 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Shmt1P50431 Gm9029-201ENSMUST00000219232 2410 ntBASIC7.38□□□□□ -1.23
Shmt1P50431 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Shmt1P50431 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Shmt1P50431 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Shmt1P50431 Gm37410-201ENSMUST00000193623 3039 ntBASIC7.38□□□□□ -1.23
Shmt1P50431 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC7.38□□□□□ -1.23
Shmt1P50431 AC183268.1-201ENSMUST00000215753 2837 ntBASIC7.37□□□□□ -1.23
Shmt1P50431 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Shmt1P50431 AC154597.1-201ENSMUST00000224095 2713 ntBASIC7.37□□□□□ -1.23
Shmt1P50431 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Shmt1P50431 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Shmt1P50431 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC7.37□□□□□ -1.23
Shmt1P50431 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Shmt1P50431 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC7.37□□□□□ -1.23
Shmt1P50431 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Shmt1P50431 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Shmt1P50431 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Shmt1P50431 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Shmt1P50431 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Shmt1P50431 Mir760-201ENSMUST00000103257 119 ntBASIC7.37□□□□□ -1.23
Shmt1P50431 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Shmt1P50431 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC7.37□□□□□ -1.23
Shmt1P50431 Gm14070-201ENSMUST00000120773 428 ntBASIC7.37□□□□□ -1.23
Shmt1P50431 Gm12978-201ENSMUST00000121250 522 ntBASIC7.37□□□□□ -1.23
Shmt1P50431 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC7.37□□□□□ -1.23
Shmt1P50431 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC7.37□□□□□ -1.23
Shmt1P50431 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Shmt1P50431 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC7.37□□□□□ -1.23
Shmt1P50431 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC7.37□□□□□ -1.23
Shmt1P50431 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC7.37□□□□□ -1.23
Shmt1P50431 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Shmt1P50431 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Shmt1P50431 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Shmt1P50431 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Shmt1P50431 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Shmt1P50431 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
Shmt1P50431 Gm27156-201ENSMUST00000184589 754 ntBASIC7.37□□□□□ -1.23
Shmt1P50431 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Shmt1P50431 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC7.37□□□□□ -1.23
Shmt1P50431 Gm29588-201ENSMUST00000185738 298 ntBASIC7.37□□□□□ -1.23
Shmt1P50431 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Shmt1P50431 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC7.37□□□□□ -1.23
Shmt1P50431 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Shmt1P50431 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC7.37□□□□□ -1.23
Shmt1P50431 Gm44279-201ENSMUST00000205154 472 ntBASIC7.37□□□□□ -1.23
Shmt1P50431 Gm44856-201ENSMUST00000206639 304 ntBASIC7.37□□□□□ -1.23
Shmt1P50431 Gm44982-201ENSMUST00000208795 471 ntBASIC7.37□□□□□ -1.23
Shmt1P50431 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC7.37□□□□□ -1.23
Shmt1P50431 AC155709.1-201ENSMUST00000218794 162 ntBASIC7.37□□□□□ -1.23
Shmt1P50431 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Shmt1P50431 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Shmt1P50431 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Shmt1P50431 Gm45221-201ENSMUST00000207822 2272 ntBASIC7.37□□□□□ -1.23
Shmt1P50431 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Shmt1P50431 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Shmt1P50431 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC7.37□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms