Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
HttP42859 Gm10540-201ENSMUST00000097581 276 ntBASIC6.93□□□□□ -1.3
HttP42859 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HttP42859 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
HttP42859 Gm26903-201ENSMUST00000180749 4583 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HttP42859 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
HttP42859 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
HttP42859 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HttP42859 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HttP42859 Sec24c-201ENSMUST00000048657 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HttP42859 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HttP42859 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HttP42859 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
HttP42859 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HttP42859 Gm37520-201ENSMUST00000194883 2672 ntBASIC6.93□□□□□ -1.3
HttP42859 Gm42661-201ENSMUST00000202364 1442 ntBASIC6.93□□□□□ -1.3
HttP42859 Gm42561-201ENSMUST00000202563 1442 ntBASIC6.93□□□□□ -1.3
HttP42859 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC6.93□□□□□ -1.3
HttP42859 C030034L19Rik-201ENSMUST00000180874 2032 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HttP42859 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC6.93□□□□□ -1.3
HttP42859 Gm4764-201ENSMUST00000130207 1233 ntBASIC6.93□□□□□ -1.3
HttP42859 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC6.93□□□□□ -1.3
HttP42859 Gm17086-201ENSMUST00000171346 484 ntBASIC6.93□□□□□ -1.3
HttP42859 Gm26731-201ENSMUST00000180683 543 ntBASIC6.93□□□□□ -1.3
HttP42859 Gm44330-201ENSMUST00000200106 143 ntBASIC6.93□□□□□ -1.3
HttP42859 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HttP42859 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC6.93□□□□□ -1.3
HttP42859 AC134254.2-201ENSMUST00000221262 170 ntBASIC6.93□□□□□ -1.3
HttP42859 AC154556.1-201ENSMUST00000224587 885 ntBASIC6.93□□□□□ -1.3
HttP42859 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC6.93□□□□□ -1.3
HttP42859 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
HttP42859 Gm37953-201ENSMUST00000195293 1884 ntBASIC6.93□□□□□ -1.3
HttP42859 Kif1b-201ENSMUST00000030806 6991 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HttP42859 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HttP42859 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC6.93□□□□□ -1.3
HttP42859 Dgkh-206ENSMUST00000228362 3308 ntBASIC6.93□□□□□ -1.3
HttP42859 Zfp462-201ENSMUST00000030131 4823 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
HttP42859 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HttP42859 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC6.93□□□□□ -1.3
HttP42859 Gm26512-201ENSMUST00000181874 3042 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HttP42859 Etv5-203ENSMUST00000168774 3773 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HttP42859 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HttP42859 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HttP42859 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC6.92□□□□□ -1.3
HttP42859 Gm12482-201ENSMUST00000120435 630 ntBASIC6.92□□□□□ -1.3
HttP42859 Gm12400-201ENSMUST00000120915 1003 ntBASIC6.92□□□□□ -1.3
HttP42859 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HttP42859 Gm25271-201ENSMUST00000157273 290 ntBASIC6.92□□□□□ -1.3
HttP42859 Mir1932-201ENSMUST00000157390 90 ntBASIC6.92□□□□□ -1.3
HttP42859 Gm37024-201ENSMUST00000192224 868 ntBASIC6.92□□□□□ -1.3
HttP42859 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
HttP42859 Gm8999-201ENSMUST00000204951 969 ntBASIC6.92□□□□□ -1.3
HttP42859 Gm5830-201ENSMUST00000049117 443 ntBASIC6.92□□□□□ -1.3
HttP42859 Gm37772-201ENSMUST00000191635 1394 ntBASIC6.92□□□□□ -1.3
HttP42859 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
HttP42859 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
HttP42859 Gm5832-201ENSMUST00000121704 1582 ntBASIC6.92□□□□□ -1.3
HttP42859 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HttP42859 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HttP42859 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
HttP42859 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC6.92□□□□□ -1.3
HttP42859 Lpin1-207ENSMUST00000222989 4103 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
HttP42859 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HttP42859 Tbc1d14-215ENSMUST00000146430 4582 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
HttP42859 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
HttP42859 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC6.92□□□□□ -1.3
HttP42859 Gm23632-201ENSMUST00000175289 125 ntBASIC6.92□□□□□ -1.3
HttP42859 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC6.92□□□□□ -1.3
HttP42859 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
HttP42859 Igkv4-83-201ENSMUST00000196933 334 ntBASIC6.92□□□□□ -1.3
HttP42859 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC6.92□□□□□ -1.3
HttP42859 AL603745.1-201ENSMUST00000215473 532 ntBASIC6.92□□□□□ -1.3
HttP42859 Myo18a-209ENSMUST00000108376 7374 ntTSL 5 BASIC6.92□□□□□ -1.3
HttP42859 Olfr1349-205ENSMUST00000213504 4935 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
HttP42859 Nup133-201ENSMUST00000044795 5808 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HttP42859 Gm44417-201ENSMUST00000203298 3359 ntBASIC6.92□□□□□ -1.3
HttP42859 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HttP42859 Gm6117-201ENSMUST00000150540 1333 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HttP42859 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HttP42859 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC6.92□□□□□ -1.3
HttP42859 Gm15016-201ENSMUST00000117300 720 ntBASIC6.92□□□□□ -1.3
HttP42859 Gm13313-201ENSMUST00000118938 1084 ntBASIC6.92□□□□□ -1.3
HttP42859 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HttP42859 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC6.92□□□□□ -1.3
HttP42859 Gm22636-201ENSMUST00000158142 275 ntBASIC6.92□□□□□ -1.3
HttP42859 Gm18833-201ENSMUST00000173218 862 ntBASIC6.92□□□□□ -1.3
HttP42859 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC6.92□□□□□ -1.3
HttP42859 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC6.92□□□□□ -1.3
HttP42859 Gm45473-201ENSMUST00000211452 616 ntBASIC6.92□□□□□ -1.3
HttP42859 AC159979.1-201ENSMUST00000227927 342 ntBASIC6.92□□□□□ -1.3
HttP42859 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
HttP42859 Gm44090-201ENSMUST00000204669 1834 ntBASIC6.92□□□□□ -1.3
HttP42859 Gm28948-201ENSMUST00000188447 2167 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HttP42859 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HttP42859 Gm38085-201ENSMUST00000195785 3062 ntBASIC6.91□□□□□ -1.3
HttP42859 Zfp661-203ENSMUST00000110368 2981 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HttP42859 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
HttP42859 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HttP42859 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HttP42859 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms