Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm7690-201ENSMUST00000190885 1399 ntBASIC8.05□□□□□ -1.12
Traf1P39428 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Traf1P39428 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC8.05□□□□□ -1.12
Traf1P39428 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Traf1P39428 Gm6494-201ENSMUST00000218604 2298 ntBASIC8.05□□□□□ -1.12
Traf1P39428 AC139754.2-201ENSMUST00000218037 1455 ntBASIC8.05□□□□□ -1.12
Traf1P39428 Gm36930-201ENSMUST00000195431 2376 ntBASIC8.05□□□□□ -1.12
Traf1P39428 Gm37078-201ENSMUST00000193314 2009 ntBASIC8.05□□□□□ -1.12
Traf1P39428 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Traf1P39428 AC138284.1-201ENSMUST00000214258 3236 ntBASIC8.05□□□□□ -1.12
Traf1P39428 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Traf1P39428 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Traf1P39428 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Traf1P39428 Gm43842-201ENSMUST00000202890 2982 ntBASIC8.04□□□□□ -1.12
Traf1P39428 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Traf1P39428 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC8.04□□□□□ -1.12
Traf1P39428 Gm37090-201ENSMUST00000195694 4105 ntBASIC8.04□□□□□ -1.12
Traf1P39428 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Traf1P39428 Gm44130-201ENSMUST00000205157 3004 ntBASIC8.04□□□□□ -1.12
Traf1P39428 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Traf1P39428 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Traf1P39428 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Traf1P39428 Gm16073-201ENSMUST00000116032 517 ntBASIC8.04□□□□□ -1.12
Traf1P39428 Gm11501-201ENSMUST00000118039 581 ntBASIC8.04□□□□□ -1.12
Traf1P39428 Gm15000-201ENSMUST00000118275 1243 ntBASIC8.04□□□□□ -1.12
Traf1P39428 Gm12175-201ENSMUST00000122081 345 ntBASIC8.04□□□□□ -1.12
Traf1P39428 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Traf1P39428 Gm5970-201ENSMUST00000131638 1216 ntBASIC8.04□□□□□ -1.12
Traf1P39428 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC8.04□□□□□ -1.12
Traf1P39428 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Traf1P39428 Gm9672-201ENSMUST00000166437 425 ntBASIC8.04□□□□□ -1.12
Traf1P39428 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Traf1P39428 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Traf1P39428 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC8.04□□□□□ -1.12
Traf1P39428 Gm44342-201ENSMUST00000196874 129 ntBASIC8.04□□□□□ -1.12
Traf1P39428 Gm44383-201ENSMUST00000198940 129 ntBASIC8.04□□□□□ -1.12
Traf1P39428 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Traf1P39428 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC8.04□□□□□ -1.12
Traf1P39428 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Traf1P39428 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Traf1P39428 AC165349.1-201ENSMUST00000217896 424 ntBASIC8.04□□□□□ -1.12
Traf1P39428 Gm3678-201ENSMUST00000218888 492 ntBASIC8.04□□□□□ -1.12
Traf1P39428 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC8.04□□□□□ -1.12
Traf1P39428 CT009742.1-201ENSMUST00000222507 702 ntBASIC8.04□□□□□ -1.12
Traf1P39428 AC154806.5-204ENSMUST00000228900 867 ntBASIC8.04□□□□□ -1.12
Traf1P39428 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Traf1P39428 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Traf1P39428 n-R5s95-201ENSMUST00000082684 118 ntBASIC8.04□□□□□ -1.12
Traf1P39428 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
Traf1P39428 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Traf1P39428 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Traf1P39428 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC8.04□□□□□ -1.12
Traf1P39428 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Traf1P39428 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Traf1P39428 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Traf1P39428 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Traf1P39428 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Traf1P39428 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Traf1P39428 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC8.04□□□□□ -1.12
Traf1P39428 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Traf1P39428 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Traf1P39428 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Traf1P39428 CT009604.1-201ENSMUST00000223900 1328 ntBASIC8.03□□□□□ -1.12
Traf1P39428 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC8.03□□□□□ -1.12
Traf1P39428 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Traf1P39428 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Traf1P39428 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Traf1P39428 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Traf1P39428 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Traf1P39428 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Traf1P39428 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Traf1P39428 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Traf1P39428 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Traf1P39428 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Traf1P39428 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC8.03□□□□□ -1.12
Traf1P39428 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC8.03□□□□□ -1.12
Traf1P39428 Gm11581-201ENSMUST00000122024 763 ntBASIC8.03□□□□□ -1.12
Traf1P39428 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Traf1P39428 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Traf1P39428 Gm19840-201ENSMUST00000169624 882 ntBASIC8.03□□□□□ -1.12
Traf1P39428 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Traf1P39428 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC8.03□□□□□ -1.12
Traf1P39428 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC8.03□□□□□ -1.12
Traf1P39428 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC8.03□□□□□ -1.12
Traf1P39428 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC8.03□□□□□ -1.12
Traf1P39428 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC8.03□□□□□ -1.12
Traf1P39428 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC8.03□□□□□ -1.12
Traf1P39428 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC8.03□□□□□ -1.12
Traf1P39428 Gm4808-201ENSMUST00000222283 1203 ntBASIC8.03□□□□□ -1.12
Traf1P39428 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC8.03□□□□□ -1.12
Traf1P39428 CT009711.4-201ENSMUST00000225685 198 ntBASIC8.03□□□□□ -1.12
Traf1P39428 AC158954.1-201ENSMUST00000228272 1006 ntBASIC8.03□□□□□ -1.12
Traf1P39428 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC8.03□□□□□ -1.12
Traf1P39428 Gm43577-201ENSMUST00000197090 3344 ntBASIC8.03□□□□□ -1.12
Traf1P39428 Gm44185-201ENSMUST00000204539 3307 ntBASIC8.03□□□□□ -1.12
Traf1P39428 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Traf1P39428 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC8.03□□□□□ -1.12
Traf1P39428 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Traf1P39428 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Traf1P39428 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms