Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Hcn3O88705 Gm42975-201ENSMUST00000200612 1491 ntBASIC6.66□□□□□ -1.34
Hcn3O88705 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Hcn3O88705 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Hcn3O88705 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Hcn3O88705 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC6.66□□□□□ -1.34
Hcn3O88705 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC6.65□□□□□ -1.34
Hcn3O88705 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Hcn3O88705 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC6.65□□□□□ -1.34
Hcn3O88705 AC153971.1-201ENSMUST00000215097 3811 ntBASIC6.65□□□□□ -1.34
Hcn3O88705 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Hcn3O88705 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Hcn3O88705 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
Hcn3O88705 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Hcn3O88705 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC6.65□□□□□ -1.34
Hcn3O88705 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Hcn3O88705 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
Hcn3O88705 Gm22152-201ENSMUST00000116966 125 ntBASIC6.65□□□□□ -1.34
Hcn3O88705 Gm15203-201ENSMUST00000117668 455 ntBASIC6.65□□□□□ -1.34
Hcn3O88705 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC6.65□□□□□ -1.34
Hcn3O88705 Gm3931-201ENSMUST00000119038 455 ntBASIC6.65□□□□□ -1.34
Hcn3O88705 Gm13988-201ENSMUST00000119363 288 ntBASIC6.65□□□□□ -1.34
Hcn3O88705 Gm13163-201ENSMUST00000119875 336 ntBASIC6.65□□□□□ -1.34
Hcn3O88705 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC6.65□□□□□ -1.34
Hcn3O88705 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC6.65□□□□□ -1.34
Hcn3O88705 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC6.65□□□□□ -1.34
Hcn3O88705 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC6.65□□□□□ -1.34
Hcn3O88705 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Hcn3O88705 Gm28011-201ENSMUST00000184097 175 ntBASIC6.65□□□□□ -1.34
Hcn3O88705 Gm29356-201ENSMUST00000186935 373 ntBASIC6.65□□□□□ -1.34
Hcn3O88705 Gm29008-201ENSMUST00000189387 298 ntBASIC6.65□□□□□ -1.34
Hcn3O88705 Gm28164-201ENSMUST00000190143 442 ntBASIC6.65□□□□□ -1.34
Hcn3O88705 Gm29435-201ENSMUST00000191310 689 ntBASIC6.65□□□□□ -1.34
Hcn3O88705 Gm8826-201ENSMUST00000193161 948 ntBASIC6.65□□□□□ -1.34
Hcn3O88705 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
Hcn3O88705 AF067063-202ENSMUST00000195234 885 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Hcn3O88705 Gm45446-201ENSMUST00000209348 216 ntBASIC6.65□□□□□ -1.34
Hcn3O88705 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Hcn3O88705 AC154806.5-204ENSMUST00000228900 867 ntBASIC6.65□□□□□ -1.34
Hcn3O88705 Olfr680-ps1-201ENSMUST00000042676 936 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Hcn3O88705 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Hcn3O88705 Cldn10-202ENSMUST00000071546 1031 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Hcn3O88705 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Hcn3O88705 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Hcn3O88705 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Hcn3O88705 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Hcn3O88705 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Hcn3O88705 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Hcn3O88705 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Hcn3O88705 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC6.65□□□□□ -1.35
Hcn3O88705 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Hcn3O88705 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC6.65□□□□□ -1.35
Hcn3O88705 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
Hcn3O88705 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Hcn3O88705 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC6.65□□□□□ -1.35
Hcn3O88705 Gm6787-201ENSMUST00000123120 1454 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Hcn3O88705 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC6.65□□□□□ -1.35
Hcn3O88705 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Hcn3O88705 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Hcn3O88705 Gm18537-202ENSMUST00000206215 1503 ntBASIC6.65□□□□□ -1.35
Hcn3O88705 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Hcn3O88705 AC022682.2-202ENSMUST00000224394 3943 ntBASIC6.65□□□□□ -1.35
Hcn3O88705 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
Hcn3O88705 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
Hcn3O88705 Gm37060-201ENSMUST00000194997 2397 ntBASIC6.65□□□□□ -1.35
Hcn3O88705 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
Hcn3O88705 Gm18508-201ENSMUST00000215790 1642 ntBASIC6.65□□□□□ -1.35
Hcn3O88705 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Hcn3O88705 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Hcn3O88705 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.35
Hcn3O88705 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Hcn3O88705 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC6.64□□□□□ -1.35
Hcn3O88705 Gm45457-201ENSMUST00000209931 3089 ntBASIC6.64□□□□□ -1.35
Hcn3O88705 Irgm1-202ENSMUST00000097271 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Hcn3O88705 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Hcn3O88705 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC6.64□□□□□ -1.35
Hcn3O88705 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Hcn3O88705 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
Hcn3O88705 Gm42668-201ENSMUST00000200747 2487 ntBASIC6.64□□□□□ -1.35
Hcn3O88705 Gm22439-201ENSMUST00000104048 132 ntBASIC6.64□□□□□ -1.35
Hcn3O88705 Gm23323-201ENSMUST00000104471 133 ntBASIC6.64□□□□□ -1.35
Hcn3O88705 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Hcn3O88705 Gm15665-201ENSMUST00000119116 847 ntBASIC6.64□□□□□ -1.35
Hcn3O88705 Gm15481-201ENSMUST00000120264 539 ntBASIC6.64□□□□□ -1.35
Hcn3O88705 Gm14787-201ENSMUST00000121236 388 ntBASIC6.64□□□□□ -1.35
Hcn3O88705 Gm5392-201ENSMUST00000122189 789 ntBASIC6.64□□□□□ -1.35
Hcn3O88705 Gm24647-201ENSMUST00000157112 113 ntBASIC6.64□□□□□ -1.35
Hcn3O88705 Gm23441-201ENSMUST00000157268 127 ntBASIC6.64□□□□□ -1.35
Hcn3O88705 Gm23031-201ENSMUST00000157998 119 ntBASIC6.64□□□□□ -1.35
Hcn3O88705 Gm7281-201ENSMUST00000160010 543 ntBASIC6.64□□□□□ -1.35
Hcn3O88705 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC6.64□□□□□ -1.35
Hcn3O88705 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
Hcn3O88705 Hist2h2bb-201ENSMUST00000177113 381 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Hcn3O88705 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Hcn3O88705 Gm27762-201ENSMUST00000183417 109 ntBASIC6.64□□□□□ -1.35
Hcn3O88705 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Hcn3O88705 1700020D05Rik-201ENSMUST00000189704 1021 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Hcn3O88705 Gm6197-201ENSMUST00000192273 454 ntBASIC6.64□□□□□ -1.35
Hcn3O88705 Gm18865-201ENSMUST00000193011 1171 ntBASIC6.64□□□□□ -1.35
Hcn3O88705 Gm37662-201ENSMUST00000195649 667 ntTSL 2 BASIC6.64□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms