Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC5.48□□□□□ -1.53
Hmgb3O54879 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hmgb3O54879 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
Hmgb3O54879 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Hmgb3O54879 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Hmgb3O54879 AC131747.2-201ENSMUST00000226121 1895 ntBASIC5.48□□□□□ -1.53
Hmgb3O54879 Ighv1-67-201ENSMUST00000103538 294 ntBASIC5.48□□□□□ -1.53
Hmgb3O54879 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Hmgb3O54879 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Hmgb3O54879 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hmgb3O54879 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC5.48□□□□□ -1.53
Hmgb3O54879 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Hmgb3O54879 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Hmgb3O54879 Banf2os-202ENSMUST00000145504 386 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Hmgb3O54879 Gm22562-201ENSMUST00000157334 111 ntBASIC5.48□□□□□ -1.53
Hmgb3O54879 0610012D04Rik-201ENSMUST00000159031 531 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Hmgb3O54879 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hmgb3O54879 Mthfr-ps1-201ENSMUST00000174153 601 ntBASIC5.48□□□□□ -1.53
Hmgb3O54879 Gm19705-204ENSMUST00000181524 413 ntTSL 2 BASIC5.48□□□□□ -1.53
Hmgb3O54879 Scgb1b25-ps-201ENSMUST00000186419 415 ntBASIC5.48□□□□□ -1.53
Hmgb3O54879 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC5.48□□□□□ -1.53
Hmgb3O54879 Gm28492-201ENSMUST00000190899 1019 ntBASIC5.48□□□□□ -1.53
Hmgb3O54879 Gm29072-201ENSMUST00000191149 678 ntBASIC5.48□□□□□ -1.53
Hmgb3O54879 Gm38143-201ENSMUST00000191751 644 ntTSL 3 BASIC5.48□□□□□ -1.53
Hmgb3O54879 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hmgb3O54879 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC5.48□□□□□ -1.53
Hmgb3O54879 Gm36448-201ENSMUST00000199916 438 ntBASIC5.48□□□□□ -1.53
Hmgb3O54879 Gm7478-201ENSMUST00000201054 581 ntBASIC5.48□□□□□ -1.53
Hmgb3O54879 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Hmgb3O54879 Gm44111-201ENSMUST00000204649 399 ntBASIC5.48□□□□□ -1.53
Hmgb3O54879 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Hmgb3O54879 Cd24a-202ENSMUST00000214476 743 ntAPPRIS ALT2 TSL 3 BASIC5.48□□□□□ -1.53
Hmgb3O54879 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC5.48□□□□□ -1.53
Hmgb3O54879 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC5.48□□□□□ -1.53
Hmgb3O54879 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC5.48□□□□□ -1.53
Hmgb3O54879 AC154838.3-201ENSMUST00000228876 965 ntBASIC5.48□□□□□ -1.53
Hmgb3O54879 Olfr1255-201ENSMUST00000057369 933 ntBASIC5.48□□□□□ -1.53
Hmgb3O54879 Gm6887-201ENSMUST00000080945 482 ntBASIC5.48□□□□□ -1.53
Hmgb3O54879 Gm23238-201ENSMUST00000083007 164 ntBASIC5.48□□□□□ -1.53
Hmgb3O54879 Gm7731-201ENSMUST00000091759 470 ntBASIC5.48□□□□□ -1.53
Hmgb3O54879 Gm38077-201ENSMUST00000193657 3245 ntBASIC5.48□□□□□ -1.53
Hmgb3O54879 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hmgb3O54879 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Hmgb3O54879 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hmgb3O54879 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hmgb3O54879 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hmgb3O54879 Gm28077-201ENSMUST00000190250 1635 ntTSL 5 BASIC5.48□□□□□ -1.53
Hmgb3O54879 Gm16123-201ENSMUST00000118647 1517 ntBASIC5.48□□□□□ -1.53
Hmgb3O54879 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC5.48□□□□□ -1.53
Hmgb3O54879 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC5.48□□□□□ -1.53
Hmgb3O54879 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Hmgb3O54879 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Hmgb3O54879 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC5.48□□□□□ -1.53
Hmgb3O54879 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Hmgb3O54879 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC5.48□□□□□ -1.53
Hmgb3O54879 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hmgb3O54879 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Hmgb3O54879 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Hmgb3O54879 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Hmgb3O54879 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
Hmgb3O54879 Gm10773-201ENSMUST00000218071 3935 ntBASIC5.47□□□□□ -1.53
Hmgb3O54879 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Hmgb3O54879 Gm44676-201ENSMUST00000208520 3055 ntBASIC5.47□□□□□ -1.53
Hmgb3O54879 Gm43842-201ENSMUST00000202890 2982 ntBASIC5.47□□□□□ -1.53
Hmgb3O54879 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Hmgb3O54879 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC5.47□□□□□ -1.53
Hmgb3O54879 AC132384.7-201ENSMUST00000220198 1391 ntBASIC5.47□□□□□ -1.53
Hmgb3O54879 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Hmgb3O54879 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Hmgb3O54879 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Hmgb3O54879 Gm44093-201ENSMUST00000204381 1802 ntBASIC5.47□□□□□ -1.53
Hmgb3O54879 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Hmgb3O54879 Gm23062-201ENSMUST00000102349 110 ntBASIC5.47□□□□□ -1.53
Hmgb3O54879 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Hmgb3O54879 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC5.47□□□□□ -1.53
Hmgb3O54879 Gm15739-201ENSMUST00000118049 872 ntBASIC5.47□□□□□ -1.53
Hmgb3O54879 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC5.47□□□□□ -1.53
Hmgb3O54879 Gm24893-201ENSMUST00000122745 369 ntBASIC5.47□□□□□ -1.53
Hmgb3O54879 Rpl36-ps2-201ENSMUST00000136893 311 ntBASIC5.47□□□□□ -1.53
Hmgb3O54879 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC5.47□□□□□ -1.53
Hmgb3O54879 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Hmgb3O54879 Gm24228-201ENSMUST00000158829 129 ntBASIC5.47□□□□□ -1.53
Hmgb3O54879 Gm15699-201ENSMUST00000159213 280 ntTSL 5 BASIC5.47□□□□□ -1.53
Hmgb3O54879 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC5.47□□□□□ -1.53
Hmgb3O54879 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Hmgb3O54879 Gm27401-201ENSMUST00000184052 173 ntBASIC5.47□□□□□ -1.53
Hmgb3O54879 Mir6974-201ENSMUST00000184381 83 ntBASIC5.47□□□□□ -1.53
Hmgb3O54879 Gm27458-201ENSMUST00000185108 121 ntBASIC5.47□□□□□ -1.53
Hmgb3O54879 Gm8304-201ENSMUST00000185744 584 ntBASIC5.47□□□□□ -1.53
Hmgb3O54879 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Hmgb3O54879 Gm29435-201ENSMUST00000191310 689 ntBASIC5.47□□□□□ -1.53
Hmgb3O54879 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC5.47□□□□□ -1.53
Hmgb3O54879 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC5.47□□□□□ -1.53
Hmgb3O54879 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC5.47□□□□□ -1.53
Hmgb3O54879 Gm37724-201ENSMUST00000195240 1221 ntBASIC5.47□□□□□ -1.53
Hmgb3O54879 Gm44213-201ENSMUST00000204977 703 ntBASIC5.47□□□□□ -1.53
Hmgb3O54879 Gm6290-201ENSMUST00000207666 1158 ntBASIC5.47□□□□□ -1.53
Hmgb3O54879 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC5.47□□□□□ -1.53
Hmgb3O54879 AC108846.4-201ENSMUST00000216783 341 ntBASIC5.47□□□□□ -1.53
Hmgb3O54879 AC133948.2-201ENSMUST00000217850 378 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms