Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm11257-201ENSMUST00000121313 315 ntBASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Gm13221-201ENSMUST00000121712 430 ntBASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC6.49□□□□□ -1.37
Trim3Q9R1R2 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Trim3Q9R1R2 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Gm24057-201ENSMUST00000158616 302 ntBASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Gm22569-201ENSMUST00000175545 124 ntBASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Trim3Q9R1R2 n-R5s93-201ENSMUST00000180091 119 ntBASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Gm27001-201ENSMUST00000182252 936 ntBASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Gm7412-201ENSMUST00000191692 605 ntBASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Gm44823-201ENSMUST00000204775 1107 ntBASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Gm9652-201ENSMUST00000209345 163 ntBASIC6.49□□□□□ -1.37
Trim3Q9R1R2 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC6.49□□□□□ -1.37
Trim3Q9R1R2 AC106830.2-201ENSMUST00000226624 943 ntBASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Gm9800-201ENSMUST00000052615 336 ntBASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim3Q9R1R2 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim3Q9R1R2 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Gm37429-201ENSMUST00000193807 1799 ntBASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim3Q9R1R2 AC124183.1-201ENSMUST00000222367 2135 ntBASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Gm11342-203ENSMUST00000224879 1324 ntBASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim3Q9R1R2 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim3Q9R1R2 AC156163.1-201ENSMUST00000215598 3369 ntBASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Gm42668-201ENSMUST00000200747 2487 ntBASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Gm12635-201ENSMUST00000117285 752 ntBASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Gm13260-201ENSMUST00000117797 1264 ntBASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Gm13739-201ENSMUST00000118020 530 ntBASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Gm13900-201ENSMUST00000119402 498 ntBASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Gm14796-201ENSMUST00000121216 959 ntBASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Gm16357-201ENSMUST00000144091 474 ntBASIC6.48□□□□□ -1.37
Trim3Q9R1R2 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Gm8715-201ENSMUST00000162728 531 ntBASIC6.48□□□□□ -1.37
Trim3Q9R1R2 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Gm37871-201ENSMUST00000194973 688 ntBASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Gm24826-202ENSMUST00000197298 216 ntBASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Gm43656-201ENSMUST00000197882 434 ntBASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Gm38840-201ENSMUST00000204716 843 ntBASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Gm18559-201ENSMUST00000208249 604 ntBASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Gm7972-201ENSMUST00000208434 1137 ntBASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC6.48□□□□□ -1.37
Trim3Q9R1R2 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Gm35638-201ENSMUST00000220724 652 ntBASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Trim3Q9R1R2 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Trim3Q9R1R2 CT030185.1-201ENSMUST00000222940 2289 ntBASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Trim3Q9R1R2 AC163660.4-201ENSMUST00000224983 2171 ntBASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 113.2 ms