Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm15160-201ENSMUST00000120553 907 ntBASIC9.22□□□□□ -0.93
Ube3bQ9ES34 Gm11606-201ENSMUST00000120706 617 ntBASIC9.22□□□□□ -0.93
Ube3bQ9ES34 Gm11474-201ENSMUST00000120814 277 ntBASIC9.22□□□□□ -0.93
Ube3bQ9ES34 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Ube3bQ9ES34 Gm4725-201ENSMUST00000151048 587 ntBASIC9.22□□□□□ -0.93
Ube3bQ9ES34 Gm23587-201ENSMUST00000157658 84 ntBASIC9.22□□□□□ -0.93
Ube3bQ9ES34 Gm22948-201ENSMUST00000158561 243 ntBASIC9.22□□□□□ -0.93
Ube3bQ9ES34 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Ube3bQ9ES34 Gm27542-201ENSMUST00000184184 256 ntBASIC9.22□□□□□ -0.93
Ube3bQ9ES34 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC9.22□□□□□ -0.93
Ube3bQ9ES34 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC9.22□□□□□ -0.93
Ube3bQ9ES34 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC9.22□□□□□ -0.93
Ube3bQ9ES34 Gm30613-201ENSMUST00000197277 512 ntTSL 3 BASIC9.22□□□□□ -0.93
Ube3bQ9ES34 Gm3103-201ENSMUST00000198073 752 ntBASIC9.22□□□□□ -0.93
Ube3bQ9ES34 Gm42976-201ENSMUST00000200313 222 ntBASIC9.22□□□□□ -0.93
Ube3bQ9ES34 Gm43226-201ENSMUST00000202438 259 ntBASIC9.22□□□□□ -0.93
Ube3bQ9ES34 Gm33248-201ENSMUST00000205836 617 ntTSL 3 BASIC9.22□□□□□ -0.93
Ube3bQ9ES34 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC9.22□□□□□ -0.93
Ube3bQ9ES34 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC9.22□□□□□ -0.93
Ube3bQ9ES34 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Ube3bQ9ES34 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Ube3bQ9ES34 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ube3bQ9ES34 Dmxl2-201ENSMUST00000118163 10614 ntAPPRIS P2 TSL 5 BASIC9.22□□□□□ -0.93
Ube3bQ9ES34 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC9.22□□□□□ -0.93
Ube3bQ9ES34 Zfp180-201ENSMUST00000068975 3901 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ube3bQ9ES34 AC158799.1-204ENSMUST00000217441 1321 ntTSL 5 BASIC9.22□□□□□ -0.93
Ube3bQ9ES34 Ndst2-201ENSMUST00000047490 3305 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ube3bQ9ES34 Adgrg7-201ENSMUST00000023437 2698 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ube3bQ9ES34 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC9.22□□□□□ -0.93
Ube3bQ9ES34 Fmr1-206ENSMUST00000114657 4076 ntTSL 5 BASIC9.22□□□□□ -0.93
Ube3bQ9ES34 Ankrd55-203ENSMUST00000165593 2749 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Ube3bQ9ES34 Etl4-203ENSMUST00000114604 4786 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ube3bQ9ES34 Musk-203ENSMUST00000098057 3422 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Ube3bQ9ES34 Gm19031-201ENSMUST00000176280 1365 ntBASIC9.22□□□□□ -0.93
Ube3bQ9ES34 AC107740.1-201ENSMUST00000216972 2401 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Ube3bQ9ES34 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Ube3bQ9ES34 Tma16-201ENSMUST00000026681 4328 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ube3bQ9ES34 Arpp21-201ENSMUST00000035085 3254 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Ube3bQ9ES34 Ston1-201ENSMUST00000064035 3287 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
Ube3bQ9ES34 Tcf4-206ENSMUST00000114982 3694 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Ube3bQ9ES34 Adam2-201ENSMUST00000022618 2551 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Ube3bQ9ES34 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC9.21□□□□□ -0.93
Ube3bQ9ES34 Gm11855-201ENSMUST00000121562 1869 ntBASIC9.21□□□□□ -0.93
Ube3bQ9ES34 Trpm8-201ENSMUST00000040210 4146 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Ube3bQ9ES34 Vmn1r51-203ENSMUST00000226542 4164 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
Ube3bQ9ES34 4933406L23Rik-201ENSMUST00000203567 1509 ntBASIC9.21□□□□□ -0.93
Ube3bQ9ES34 Bbs12-202ENSMUST00000108121 2348 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Ube3bQ9ES34 Gm37633-201ENSMUST00000192858 2700 ntBASIC9.21□□□□□ -0.93
Ube3bQ9ES34 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.93
Ube3bQ9ES34 AC165260.6-202ENSMUST00000224959 1958 ntBASIC9.21□□□□□ -0.93
Ube3bQ9ES34 Gm42595-201ENSMUST00000196771 1607 ntBASIC9.21□□□□□ -0.93
Ube3bQ9ES34 Sbno1-216ENSMUST00000199808 10161 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Ube3bQ9ES34 Cfap161-202ENSMUST00000119134 2868 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Ube3bQ9ES34 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Ube3bQ9ES34 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Ube3bQ9ES34 Gm14931-201ENSMUST00000111079 253 ntBASIC9.21□□□□□ -0.94
Ube3bQ9ES34 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Ube3bQ9ES34 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Ube3bQ9ES34 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC9.21□□□□□ -0.94
Ube3bQ9ES34 Gm11866-201ENSMUST00000120209 335 ntBASIC9.21□□□□□ -0.94
Ube3bQ9ES34 Gm12770-201ENSMUST00000121734 462 ntBASIC9.21□□□□□ -0.94
Ube3bQ9ES34 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Ube3bQ9ES34 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Ube3bQ9ES34 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Ube3bQ9ES34 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC9.21□□□□□ -0.94
Ube3bQ9ES34 Gm23145-201ENSMUST00000178912 79 ntBASIC9.21□□□□□ -0.94
Ube3bQ9ES34 Gm27019-201ENSMUST00000183056 404 ntBASIC9.21□□□□□ -0.94
Ube3bQ9ES34 Gm27458-201ENSMUST00000185108 121 ntBASIC9.21□□□□□ -0.94
Ube3bQ9ES34 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC9.21□□□□□ -0.94
Ube3bQ9ES34 Gm37152-201ENSMUST00000193369 1175 ntBASIC9.21□□□□□ -0.94
Ube3bQ9ES34 Gm38109-201ENSMUST00000195386 181 ntBASIC9.21□□□□□ -0.94
Ube3bQ9ES34 Gm42424-201ENSMUST00000198319 376 ntBASIC9.21□□□□□ -0.94
Ube3bQ9ES34 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC9.21□□□□□ -0.94
Ube3bQ9ES34 Dcp2-202ENSMUST00000202306 398 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Ube3bQ9ES34 Gm18765-201ENSMUST00000203166 660 ntBASIC9.21□□□□□ -0.94
Ube3bQ9ES34 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Ube3bQ9ES34 Olfr674-ps1-201ENSMUST00000209383 946 ntBASIC9.21□□□□□ -0.94
Ube3bQ9ES34 Gm2225-201ENSMUST00000209570 377 ntBASIC9.21□□□□□ -0.94
Ube3bQ9ES34 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC9.21□□□□□ -0.94
Ube3bQ9ES34 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC9.21□□□□□ -0.94
Ube3bQ9ES34 Gm45925-202ENSMUST00000219904 1136 ntBASIC9.21□□□□□ -0.94
Ube3bQ9ES34 Gm33467-201ENSMUST00000221885 652 ntTSL 3 BASIC9.21□□□□□ -0.94
Ube3bQ9ES34 AC164117.2-201ENSMUST00000222090 327 ntBASIC9.21□□□□□ -0.94
Ube3bQ9ES34 AC161537.1-202ENSMUST00000228450 868 ntBASIC9.21□□□□□ -0.94
Ube3bQ9ES34 Olfr609-201ENSMUST00000055787 965 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Ube3bQ9ES34 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Ube3bQ9ES34 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Ube3bQ9ES34 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC9.21□□□□□ -0.94
Ube3bQ9ES34 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Ube3bQ9ES34 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Ube3bQ9ES34 Spag11b-202ENSMUST00000110767 1740 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Ube3bQ9ES34 Rufy3-207ENSMUST00000199312 2182 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Ube3bQ9ES34 Gm20388-201ENSMUST00000127664 3953 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Ube3bQ9ES34 Gm32647-202ENSMUST00000206579 3147 ntTSL 3 BASIC9.21□□□□□ -0.94
Ube3bQ9ES34 Gm43800-201ENSMUST00000201868 2731 ntBASIC9.21□□□□□ -0.94
Ube3bQ9ES34 Lepr-201ENSMUST00000037552 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Ube3bQ9ES34 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Ube3bQ9ES34 Nrxn3-210ENSMUST00000167887 3303 ntTSL 5 BASIC9.21□□□□□ -0.94
Ube3bQ9ES34 Cdc14b-202ENSMUST00000109769 2886 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Ube3bQ9ES34 Casp8-202ENSMUST00000165549 1917 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms