Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Sf3a3Q9D554 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
Sf3a3Q9D554 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Sf3a3Q9D554 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC6.77□□□□□ -1.33
Sf3a3Q9D554 Gm4991-201ENSMUST00000118899 1552 ntBASIC6.77□□□□□ -1.33
Sf3a3Q9D554 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Sf3a3Q9D554 AC159006.2-201ENSMUST00000228734 4144 ntBASIC6.77□□□□□ -1.33
Sf3a3Q9D554 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Sf3a3Q9D554 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Sf3a3Q9D554 Gm38368-201ENSMUST00000193181 1335 ntBASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Gm37943-201ENSMUST00000194053 3944 ntBASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3a3Q9D554 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Igkv1-117-201ENSMUST00000103317 404 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Gm22671-201ENSMUST00000104420 134 ntBASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Gm17184-201ENSMUST00000111864 462 ntBASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Mrps18c-202ENSMUST00000112898 460 ntTSL 3 BASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Gm15530-201ENSMUST00000122206 555 ntBASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Rpl36-ps2-201ENSMUST00000136893 311 ntBASIC6.76□□□□□ -1.33
Sf3a3Q9D554 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Klra13-ps-202ENSMUST00000144414 769 ntTSL 5 BASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Gm4835-201ENSMUST00000155839 972 ntBASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Gm24286-201ENSMUST00000157632 128 ntBASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Gm22670-201ENSMUST00000158724 143 ntBASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Gm22690-201ENSMUST00000175054 110 ntBASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Gm5839-201ENSMUST00000182835 1007 ntBASIC6.76□□□□□ -1.33
Sf3a3Q9D554 1700096J18Rik-201ENSMUST00000190043 482 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Gm3841-201ENSMUST00000191399 451 ntBASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Gm37684-201ENSMUST00000192779 355 ntBASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Gm32102-201ENSMUST00000196885 241 ntBASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Gm43436-201ENSMUST00000199308 147 ntBASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Gm2505-201ENSMUST00000200413 825 ntBASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Gm44690-201ENSMUST00000207984 382 ntBASIC6.76□□□□□ -1.33
Sf3a3Q9D554 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3a3Q9D554 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3a3Q9D554 AV026068-219ENSMUST00000224148 933 ntBASIC6.76□□□□□ -1.33
Sf3a3Q9D554 AC126939.4-201ENSMUST00000225360 743 ntBASIC6.76□□□□□ -1.33
Sf3a3Q9D554 AC164597.1-201ENSMUST00000226538 514 ntBASIC6.76□□□□□ -1.33
Sf3a3Q9D554 AC131029.2-203ENSMUST00000228116 1244 ntBASIC6.76□□□□□ -1.33
Sf3a3Q9D554 AC154806.5-204ENSMUST00000228900 867 ntBASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Olfr1179-201ENSMUST00000099825 924 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Rnase4-202ENSMUST00000169895 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Gm45297-201ENSMUST00000209893 3483 ntBASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3a3Q9D554 AC160028.2-201ENSMUST00000218937 2519 ntBASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Gm9030-201ENSMUST00000218405 2410 ntBASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Gm9029-201ENSMUST00000219232 2410 ntBASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Gm44039-201ENSMUST00000204192 2246 ntBASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC6.76□□□□□ -1.33
Sf3a3Q9D554 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sf3a3Q9D554 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Sf3a3Q9D554 Gm43891-201ENSMUST00000205132 3112 ntBASIC6.75□□□□□ -1.33
Sf3a3Q9D554 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sf3a3Q9D554 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Sf3a3Q9D554 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sf3a3Q9D554 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sf3a3Q9D554 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sf3a3Q9D554 Gm24462-201ENSMUST00000102430 106 ntBASIC6.75□□□□□ -1.33
Sf3a3Q9D554 Gm22150-201ENSMUST00000104447 135 ntBASIC6.75□□□□□ -1.33
Sf3a3Q9D554 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC6.75□□□□□ -1.33
Sf3a3Q9D554 Gm13566-201ENSMUST00000117428 1142 ntBASIC6.75□□□□□ -1.33
Sf3a3Q9D554 Gm11880-201ENSMUST00000117612 399 ntBASIC6.75□□□□□ -1.33
Sf3a3Q9D554 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC6.75□□□□□ -1.33
Sf3a3Q9D554 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC6.75□□□□□ -1.33
Sf3a3Q9D554 Gm24228-201ENSMUST00000158829 129 ntBASIC6.75□□□□□ -1.33
Sf3a3Q9D554 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC6.75□□□□□ -1.33
Sf3a3Q9D554 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Sf3a3Q9D554 Gm26436-201ENSMUST00000180325 132 ntBASIC6.75□□□□□ -1.33
Sf3a3Q9D554 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Sf3a3Q9D554 Avpr1b-202ENSMUST00000190410 623 ntTSL 5 BASIC6.75□□□□□ -1.33
Sf3a3Q9D554 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC6.75□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms