Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 Mir503-201ENSMUST00000102168 71 ntBASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 Gm6877-201ENSMUST00000119347 1101 ntBASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 Gm14465-201ENSMUST00000120603 567 ntBASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 Gm15188-201ENSMUST00000121264 704 ntBASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 Gm12321-201ENSMUST00000121485 804 ntBASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 Gm22342-201ENSMUST00000122647 298 ntBASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 Gm25277-201ENSMUST00000157266 324 ntBASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 Gm23222-201ENSMUST00000158117 76 ntBASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 Gm5575-201ENSMUST00000190879 398 ntBASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 Gm28070-201ENSMUST00000191502 445 ntBASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 Gm37260-201ENSMUST00000193748 1251 ntBASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 Gm19030-201ENSMUST00000194947 552 ntBASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 Gm44931-201ENSMUST00000206056 545 ntBASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 AC127224.1-201ENSMUST00000218094 453 ntBASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 Gm19011-201ENSMUST00000221777 808 ntBASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 AC117949.1-201ENSMUST00000225547 419 ntBASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 Diaph3-204ENSMUST00000226254 682 ntBASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 CT025630.2-201ENSMUST00000228293 487 ntBASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 Olfr480-201ENSMUST00000071658 1029 ntBASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 Klk1b8-201ENSMUST00000072204 859 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 Malat1-201ENSMUST00000172812 6983 ntBASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 Gm37124-201ENSMUST00000192140 1992 ntBASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Ddx56Q9D0R4 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Gm45174-201ENSMUST00000208884 3065 ntBASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Gm36930-201ENSMUST00000195431 2376 ntBASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Gm45322-201ENSMUST00000211642 1361 ntBASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Lrrc51-203ENSMUST00000106963 835 ntTSL 2 BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Gm14279-201ENSMUST00000117142 332 ntBASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Gm10243-201ENSMUST00000117571 333 ntBASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Gm14727-201ENSMUST00000118526 525 ntBASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Gm15780-201ENSMUST00000121283 935 ntBASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Gm14721-201ENSMUST00000121381 525 ntBASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Mup-ps15-201ENSMUST00000121741 539 ntBASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Gm23426-201ENSMUST00000122483 318 ntBASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Cfap100-205ENSMUST00000135757 289 ntTSL 5 BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Gm11816-202ENSMUST00000149848 714 ntTSL 2 BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Gm24057-201ENSMUST00000158616 302 ntBASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Tecr-202ENSMUST00000163837 1272 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Gm17032-201ENSMUST00000164367 338 ntTSL 3 BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Gm18698-201ENSMUST00000192327 668 ntBASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Gm29815-201ENSMUST00000202418 178 ntBASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Gm43926-201ENSMUST00000203978 430 ntBASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Gm38840-201ENSMUST00000204716 843 ntBASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Gm44258-201ENSMUST00000204925 301 ntBASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Gm44833-201ENSMUST00000208368 331 ntBASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Gm8291-201ENSMUST00000209635 1261 ntBASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 AC102582.1-201ENSMUST00000215376 378 ntBASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC7.48□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms