Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Brf1Q8CFK2 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Pdilt-201ENSMUST00000033267 2146 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Gm18701-201ENSMUST00000188281 1536 ntBASIC8.24□□□□□ -1.09
Brf1Q8CFK2 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Gm5319-201ENSMUST00000118965 873 ntBASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Gm6142-201ENSMUST00000120290 325 ntBASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Gm23673-201ENSMUST00000157474 298 ntBASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Gm25717-201ENSMUST00000158631 353 ntBASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Gm8715-201ENSMUST00000162728 531 ntBASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC8.24□□□□□ -1.09
Brf1Q8CFK2 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Gm37383-201ENSMUST00000191750 745 ntBASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Gm44342-201ENSMUST00000196874 129 ntBASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Gm9710-201ENSMUST00000198053 499 ntBASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Gm44383-201ENSMUST00000198940 129 ntBASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC8.24□□□□□ -1.09
Brf1Q8CFK2 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC8.24□□□□□ -1.09
Brf1Q8CFK2 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Gm4808-201ENSMUST00000222283 1203 ntBASIC8.24□□□□□ -1.09
Brf1Q8CFK2 AC153152.2-201ENSMUST00000223165 959 ntBASIC8.24□□□□□ -1.09
Brf1Q8CFK2 AC154441.1-201ENSMUST00000223653 1006 ntBASIC8.24□□□□□ -1.09
Brf1Q8CFK2 CT025523.1-201ENSMUST00000228318 694 ntBASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Gm18313-201ENSMUST00000221036 1784 ntBASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Brf1Q8CFK2 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Brf1Q8CFK2 AC129208.1-201ENSMUST00000227474 2906 ntBASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Gm11590-201ENSMUST00000118999 1455 ntBASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Gm42837-201ENSMUST00000197071 2829 ntBASIC8.24□□□□□ -1.09
Brf1Q8CFK2 Ppp2r5c-202ENSMUST00000109832 4108 ntTSL 2 BASIC8.23□□□□□ -1.09
Brf1Q8CFK2 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC8.23□□□□□ -1.09
Brf1Q8CFK2 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Brf1Q8CFK2 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Brf1Q8CFK2 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Brf1Q8CFK2 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Brf1Q8CFK2 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Brf1Q8CFK2 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Brf1Q8CFK2 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC8.23□□□□□ -1.09
Brf1Q8CFK2 Gm36981-201ENSMUST00000192340 4485 ntBASIC8.23□□□□□ -1.09
Brf1Q8CFK2 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Brf1Q8CFK2 Gm11245-201ENSMUST00000119419 1037 ntBASIC8.23□□□□□ -1.09
Brf1Q8CFK2 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC8.23□□□□□ -1.09
Brf1Q8CFK2 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Brf1Q8CFK2 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Brf1Q8CFK2 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Brf1Q8CFK2 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Brf1Q8CFK2 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Brf1Q8CFK2 Mir8105-201ENSMUST00000184718 89 ntBASIC8.23□□□□□ -1.09
Brf1Q8CFK2 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Brf1Q8CFK2 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC8.23□□□□□ -1.09
Brf1Q8CFK2 Gm43546-201ENSMUST00000196721 943 ntBASIC8.23□□□□□ -1.09
Brf1Q8CFK2 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC8.23□□□□□ -1.09
Brf1Q8CFK2 Gm42464-202ENSMUST00000198111 774 ntBASIC8.23□□□□□ -1.09
Brf1Q8CFK2 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC8.23□□□□□ -1.09
Brf1Q8CFK2 Gm42713-201ENSMUST00000202709 945 ntBASIC8.23□□□□□ -1.09
Brf1Q8CFK2 Gm44147-201ENSMUST00000204658 94 ntBASIC8.23□□□□□ -1.09
Brf1Q8CFK2 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC8.23□□□□□ -1.09
Brf1Q8CFK2 Gm6681-201ENSMUST00000205215 607 ntBASIC8.23□□□□□ -1.09
Brf1Q8CFK2 Gm45136-201ENSMUST00000205793 943 ntBASIC8.23□□□□□ -1.09
Brf1Q8CFK2 Gm45279-201ENSMUST00000210315 391 ntBASIC8.23□□□□□ -1.09
Brf1Q8CFK2 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC8.23□□□□□ -1.09
Brf1Q8CFK2 Gm46311-201ENSMUST00000217971 203 ntBASIC8.23□□□□□ -1.09
Brf1Q8CFK2 AC124184.1-201ENSMUST00000218167 283 ntBASIC8.23□□□□□ -1.09
Brf1Q8CFK2 AC132833.4-201ENSMUST00000228313 203 ntBASIC8.23□□□□□ -1.09
Brf1Q8CFK2 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Brf1Q8CFK2 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Brf1Q8CFK2 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Brf1Q8CFK2 Gm22005-201ENSMUST00000082795 141 ntBASIC8.23□□□□□ -1.09
Brf1Q8CFK2 Gm7731-201ENSMUST00000091759 470 ntBASIC8.23□□□□□ -1.09
Brf1Q8CFK2 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Brf1Q8CFK2 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Brf1Q8CFK2 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
Brf1Q8CFK2 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms