Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 AC159006.2-201ENSMUST00000228734 4144 ntBASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 Olfr1128-201ENSMUST00000102624 936 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 Trbv14-201ENSMUST00000103272 368 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 Gm16284-201ENSMUST00000140995 400 ntBASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 Gm24756-201ENSMUST00000177002 96 ntBASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 Gm27001-201ENSMUST00000182252 936 ntBASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 Pea15b-201ENSMUST00000182806 387 ntBASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 Gm29369-201ENSMUST00000190674 615 ntBASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 Ighv1-38-201ENSMUST00000192755 349 ntBASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 AC131654.1-201ENSMUST00000219675 745 ntBASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 AC122327.2-201ENSMUST00000220883 120 ntBASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 AC122327.3-201ENSMUST00000221852 120 ntBASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 AC166341.1-201ENSMUST00000223360 105 ntBASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 AC124715.1-201ENSMUST00000228480 754 ntBASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 Gm25587-201ENSMUST00000082498 166 ntBASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 n-R5s29-201ENSMUST00000082836 119 ntBASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 Mir135a-1-201ENSMUST00000083473 90 ntBASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 Gm42874-201ENSMUST00000198888 1774 ntBASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Gm5605-201ENSMUST00000208940 1305 ntBASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Gm25724-201ENSMUST00000104531 117 ntBASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Gm6746-201ENSMUST00000108774 483 ntBASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Gm13566-201ENSMUST00000117428 1142 ntBASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Gm12242-201ENSMUST00000118824 738 ntBASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Gm12447-201ENSMUST00000119110 470 ntBASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Gm14613-201ENSMUST00000122239 752 ntBASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Gm7420-201ENSMUST00000162836 842 ntBASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Gm25574-201ENSMUST00000175245 249 ntBASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Gm27684-201ENSMUST00000183778 80 ntBASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Gm28573-201ENSMUST00000187821 380 ntBASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Gm21301-201ENSMUST00000189476 699 ntBASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Gm28145-201ENSMUST00000189742 380 ntBASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Gm28400-201ENSMUST00000191332 380 ntBASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Gm38373-201ENSMUST00000192042 288 ntBASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Gm42823-201ENSMUST00000197975 256 ntTSL 3 BASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Gm17918-201ENSMUST00000205315 574 ntBASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Gm44931-201ENSMUST00000206056 545 ntBASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Gm4247-201ENSMUST00000211441 1042 ntBASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 AC127242.3-201ENSMUST00000222009 580 ntBASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 AC165157.1-201ENSMUST00000222981 580 ntBASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Cst11-201ENSMUST00000028934 615 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Cd74-201ENSMUST00000050487 1218 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Gm16123-201ENSMUST00000118647 1517 ntBASIC7.04□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms