Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Ccdc28bQ8CEG5 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc28bQ8CEG5 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc28bQ8CEG5 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC6.73□□□□□ -1.33
Ccdc28bQ8CEG5 Gm37541-201ENSMUST00000192464 2315 ntBASIC6.73□□□□□ -1.33
Ccdc28bQ8CEG5 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc28bQ8CEG5 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc28bQ8CEG5 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Ccdc28bQ8CEG5 AC159244.3-201ENSMUST00000222887 3153 ntBASIC6.73□□□□□ -1.33
Ccdc28bQ8CEG5 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc28bQ8CEG5 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc28bQ8CEG5 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC6.73□□□□□ -1.33
Ccdc28bQ8CEG5 Lipt1-201ENSMUST00000041621 1485 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc28bQ8CEG5 Gm45520-201ENSMUST00000210109 2031 ntBASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Gm37435-201ENSMUST00000192078 3947 ntBASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Gm20644-201ENSMUST00000176721 2063 ntBASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Gm12944-201ENSMUST00000119262 463 ntBASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Gm24057-201ENSMUST00000158616 302 ntBASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Gm24228-201ENSMUST00000158829 129 ntBASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Gm5656-201ENSMUST00000171020 1096 ntBASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Gm17973-201ENSMUST00000174509 520 ntBASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Gm4373-201ENSMUST00000178571 556 ntBASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Gm19705-204ENSMUST00000181524 413 ntTSL 2 BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Gm21728-201ENSMUST00000188442 695 ntBASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Gm21889-201ENSMUST00000188487 695 ntBASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Gm20932-201ENSMUST00000189115 694 ntBASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Gm21920-201ENSMUST00000190042 695 ntBASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Avpr1b-202ENSMUST00000190410 623 ntTSL 5 BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Ms4a10-203ENSMUST00000191343 862 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Gm8101-201ENSMUST00000192796 478 ntBASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Gm43226-201ENSMUST00000202438 259 ntBASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Gm43926-201ENSMUST00000203978 430 ntBASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Clec4n-206ENSMUST00000205129 363 ntTSL 5 BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Gm8077-201ENSMUST00000209221 1024 ntBASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 AC152819.1-201ENSMUST00000220435 871 ntTSL 5 BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Gm7762-201ENSMUST00000220595 604 ntTSL 3 BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Gm7441-201ENSMUST00000220697 1074 ntBASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 AC154755.1-201ENSMUST00000225244 537 ntBASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 AC125117.2-201ENSMUST00000228344 1140 ntBASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Gm9801-201ENSMUST00000054860 408 ntBASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Ms4a10-201ENSMUST00000072748 1011 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 AC154630.1-201ENSMUST00000215334 2440 ntBASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Gm8401-201ENSMUST00000120248 1739 ntBASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Gm5361-201ENSMUST00000211041 1498 ntBASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Gm36947-201ENSMUST00000194709 2249 ntBASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28bQ8CEG5 Gtf2e2-203ENSMUST00000171010 1664 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Ccdc28bQ8CEG5 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Ccdc28bQ8CEG5 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC6.71□□□□□ -1.33
Ccdc28bQ8CEG5 Gm18830-201ENSMUST00000199036 1396 ntBASIC6.71□□□□□ -1.33
Ccdc28bQ8CEG5 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Ccdc28bQ8CEG5 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC6.71□□□□□ -1.33
Ccdc28bQ8CEG5 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 Gm45073-201ENSMUST00000207688 4247 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms