Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 n-R5s48-201ENSMUST00000122482 110 ntBASIC7.67□□□□□ -1.18
Ccdc38Q8CDN8 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC7.67□□□□□ -1.18
Ccdc38Q8CDN8 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC7.67□□□□□ -1.18
Ccdc38Q8CDN8 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC7.67□□□□□ -1.18
Ccdc38Q8CDN8 Mir7115-201ENSMUST00000184275 64 ntBASIC7.67□□□□□ -1.18
Ccdc38Q8CDN8 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC7.67□□□□□ -1.18
Ccdc38Q8CDN8 1700016L21Rik-202ENSMUST00000189139 629 ntTSL 3 BASIC7.67□□□□□ -1.18
Ccdc38Q8CDN8 Gm29369-201ENSMUST00000190674 615 ntBASIC7.67□□□□□ -1.18
Ccdc38Q8CDN8 Gm18430-201ENSMUST00000197534 682 ntBASIC7.67□□□□□ -1.18
Ccdc38Q8CDN8 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC7.67□□□□□ -1.18
Ccdc38Q8CDN8 Gm6885-201ENSMUST00000217261 372 ntBASIC7.67□□□□□ -1.18
Ccdc38Q8CDN8 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC7.67□□□□□ -1.18
Ccdc38Q8CDN8 CT030260.1-201ENSMUST00000223243 442 ntBASIC7.67□□□□□ -1.18
Ccdc38Q8CDN8 4930556J24Rik-201ENSMUST00000042344 1220 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ccdc38Q8CDN8 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Ccdc38Q8CDN8 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC7.67□□□□□ -1.18
Ccdc38Q8CDN8 Mrpl42-201ENSMUST00000075829 666 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ccdc38Q8CDN8 n-R5s97-201ENSMUST00000082585 113 ntBASIC7.67□□□□□ -1.18
Ccdc38Q8CDN8 Wfdc10-201ENSMUST00000094344 459 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ccdc38Q8CDN8 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC7.67□□□□□ -1.18
Ccdc38Q8CDN8 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ccdc38Q8CDN8 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ccdc38Q8CDN8 Gm15930-201ENSMUST00000156603 2037 ntBASIC7.67□□□□□ -1.18
Ccdc38Q8CDN8 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ccdc38Q8CDN8 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Ccdc38Q8CDN8 Gm31267-201ENSMUST00000218941 1397 ntTSL 3 BASIC7.67□□□□□ -1.18
Ccdc38Q8CDN8 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Ccdc38Q8CDN8 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC7.67□□□□□ -1.18
Ccdc38Q8CDN8 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC7.67□□□□□ -1.18
Ccdc38Q8CDN8 AC162301.1-201ENSMUST00000228785 1542 ntBASIC7.67□□□□□ -1.18
Ccdc38Q8CDN8 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC7.67□□□□□ -1.18
Ccdc38Q8CDN8 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC7.67□□□□□ -1.18
Ccdc38Q8CDN8 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Ccdc38Q8CDN8 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Gm14886-201ENSMUST00000117208 2629 ntBASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Gm18248-201ENSMUST00000191164 1846 ntBASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Gm37423-201ENSMUST00000194246 3342 ntBASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Gm23437-201ENSMUST00000104036 127 ntBASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Gm25498-201ENSMUST00000104424 129 ntBASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Gm17184-201ENSMUST00000111864 462 ntBASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Gm11816-202ENSMUST00000149848 714 ntTSL 2 BASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Gm6061-201ENSMUST00000175860 492 ntBASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Gm26528-201ENSMUST00000181965 283 ntBASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Gm28958-201ENSMUST00000185864 703 ntBASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Gm3121-201ENSMUST00000187086 406 ntBASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Gm29072-201ENSMUST00000191149 678 ntBASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Gm30517-201ENSMUST00000197350 772 ntBASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 AC152819.1-201ENSMUST00000220435 871 ntTSL 5 BASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Gm19238-201ENSMUST00000221936 1260 ntBASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 AC134869.2-201ENSMUST00000225788 421 ntBASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Gm21781-201ENSMUST00000178920 4838 ntBASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Gm45297-201ENSMUST00000209893 3483 ntBASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC7.66□□□□□ -1.18
Ccdc38Q8CDN8 AC022775.1-201ENSMUST00000228163 2698 ntBASIC7.65□□□□□ -1.18
Ccdc38Q8CDN8 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC7.65□□□□□ -1.18
Ccdc38Q8CDN8 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
Ccdc38Q8CDN8 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
Ccdc38Q8CDN8 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ccdc38Q8CDN8 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ccdc38Q8CDN8 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Ccdc38Q8CDN8 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Ccdc38Q8CDN8 Gm15731-201ENSMUST00000146887 2195 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Ccdc38Q8CDN8 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms