Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Gm37373-201ENSMUST00000194005 2812 ntBASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 AC139758.3-201ENSMUST00000226853 2704 ntBASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Mir708-201ENSMUST00000102189 109 ntBASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Gm23527-201ENSMUST00000104570 130 ntBASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Gm8534-201ENSMUST00000118553 766 ntBASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Gm4911-201ENSMUST00000119388 945 ntBASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Gm13222-201ENSMUST00000119638 138 ntBASIC6.98□□□□□ -1.29
Trub1Q8C0D0 AC122263.2-201ENSMUST00000145909 586 ntTSL 3 BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Gm24422-201ENSMUST00000157800 119 ntBASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Gm27360-201ENSMUST00000183487 80 ntBASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Mir8114-201ENSMUST00000183582 111 ntBASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Gm29197-201ENSMUST00000185922 702 ntBASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Gm8182-201ENSMUST00000197863 769 ntBASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Cd69-203ENSMUST00000204411 560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Gm7252-201ENSMUST00000223284 456 ntBASIC6.98□□□□□ -1.29
Trub1Q8C0D0 AC154361.1-201ENSMUST00000225694 745 ntBASIC6.98□□□□□ -1.29
Trub1Q8C0D0 AC133958.1-201ENSMUST00000227085 961 ntBASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 AL450321.1-201ENSMUST00000220600 3550 ntBASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Gm37423-201ENSMUST00000194246 3342 ntBASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Olfr1122-202ENSMUST00000215371 5036 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC6.97□□□□□ -1.29
Trub1Q8C0D0 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trub1Q8C0D0 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trub1Q8C0D0 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trub1Q8C0D0 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Trub1Q8C0D0 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trub1Q8C0D0 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC6.97□□□□□ -1.29
Trub1Q8C0D0 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trub1Q8C0D0 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC6.97□□□□□ -1.29
Trub1Q8C0D0 AC159264.1-202ENSMUST00000224856 3162 ntBASIC6.97□□□□□ -1.29
Trub1Q8C0D0 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trub1Q8C0D0 Gm12468-201ENSMUST00000116189 404 ntBASIC6.97□□□□□ -1.29
Trub1Q8C0D0 Gm12447-201ENSMUST00000119110 470 ntBASIC6.97□□□□□ -1.29
Trub1Q8C0D0 Gm15316-201ENSMUST00000121082 421 ntBASIC6.97□□□□□ -1.29
Trub1Q8C0D0 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC6.97□□□□□ -1.29
Trub1Q8C0D0 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC6.97□□□□□ -1.29
Trub1Q8C0D0 Gm24680-201ENSMUST00000158759 126 ntBASIC6.97□□□□□ -1.29
Trub1Q8C0D0 Gm23027-201ENSMUST00000158771 158 ntBASIC6.97□□□□□ -1.29
Trub1Q8C0D0 Lrrc51-210ENSMUST00000163903 939 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trub1Q8C0D0 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trub1Q8C0D0 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trub1Q8C0D0 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trub1Q8C0D0 Gm28119-201ENSMUST00000185538 298 ntTSL 5 BASIC6.97□□□□□ -1.29
Trub1Q8C0D0 Gm6679-201ENSMUST00000191467 1869 ntBASIC6.97□□□□□ -1.29
Trub1Q8C0D0 Gm43160-201ENSMUST00000196453 421 ntBASIC6.97□□□□□ -1.29
Trub1Q8C0D0 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trub1Q8C0D0 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC6.97□□□□□ -1.29
Trub1Q8C0D0 Gm9419-201ENSMUST00000200672 567 ntBASIC6.97□□□□□ -1.29
Trub1Q8C0D0 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trub1Q8C0D0 Gm44213-201ENSMUST00000204977 703 ntBASIC6.97□□□□□ -1.29
Trub1Q8C0D0 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC6.97□□□□□ -1.29
Trub1Q8C0D0 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trub1Q8C0D0 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Trub1Q8C0D0 AC155270.1-202ENSMUST00000221503 352 ntBASIC6.97□□□□□ -1.29
Trub1Q8C0D0 CT030238.3-201ENSMUST00000227352 875 ntBASIC6.97□□□□□ -1.29
Trub1Q8C0D0 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trub1Q8C0D0 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Trub1Q8C0D0 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC6.97□□□□□ -1.29
Trub1Q8C0D0 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Trub1Q8C0D0 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trub1Q8C0D0 Gm43279-201ENSMUST00000202376 2512 ntBASIC6.97□□□□□ -1.29
Trub1Q8C0D0 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trub1Q8C0D0 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trub1Q8C0D0 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms