Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC9.44□□□□□ -0.9
Usp40Q8BWR4 AC132104.1-201ENSMUST00000213615 260 ntBASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Gm17950-201ENSMUST00000214617 646 ntBASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Gm35619-201ENSMUST00000222548 600 ntBASIC9.44□□□□□ -0.9
Usp40Q8BWR4 AC132260.1-201ENSMUST00000225499 734 ntBASIC9.44□□□□□ -0.9
Usp40Q8BWR4 AC158750.1-201ENSMUST00000226163 634 ntBASIC9.44□□□□□ -0.9
Usp40Q8BWR4 AC105324.1-201ENSMUST00000227844 386 ntBASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usp40Q8BWR4 AC139750.1-201ENSMUST00000223962 1300 ntBASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usp40Q8BWR4 4931406P16Rik-210ENSMUST00000206399 4158 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usp40Q8BWR4 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Gm8276-201ENSMUST00000192231 1812 ntBASIC9.44□□□□□ -0.9
Usp40Q8BWR4 AC153143.2-201ENSMUST00000220999 1804 ntBASIC9.44□□□□□ -0.9
Usp40Q8BWR4 AC124516.2-201ENSMUST00000221455 1829 ntBASIC9.44□□□□□ -0.9
Usp40Q8BWR4 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Ppargc1a-205ENSMUST00000196968 2754 ntTSL 5 BASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Usp40Q8BWR4 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Kcnk10-202ENSMUST00000221240 7460 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Usp40Q8BWR4 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Usp40Q8BWR4 Rc3h1-202ENSMUST00000161609 11006 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Usp40Q8BWR4 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Usp40Q8BWR4 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC9.43□□□□□ -0.9
Usp40Q8BWR4 Gm13083-201ENSMUST00000105773 2464 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Usp40Q8BWR4 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
Usp40Q8BWR4 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Usp40Q8BWR4 Rassf6-201ENSMUST00000031317 1958 ntAPPRIS P3 TSL 5 BASIC9.43□□□□□ -0.9
Usp40Q8BWR4 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Usp40Q8BWR4 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC9.43□□□□□ -0.9
Usp40Q8BWR4 Phxr4-202ENSMUST00000216590 1391 ntBASIC9.43□□□□□ -0.9
Usp40Q8BWR4 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Usp40Q8BWR4 Sv2c-201ENSMUST00000161263 9101 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Usp40Q8BWR4 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Usp40Q8BWR4 Gm14864-201ENSMUST00000116164 1087 ntBASIC9.43□□□□□ -0.9
Usp40Q8BWR4 Gm15216-201ENSMUST00000118058 277 ntBASIC9.43□□□□□ -0.9
Usp40Q8BWR4 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Usp40Q8BWR4 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC9.43□□□□□ -0.9
Usp40Q8BWR4 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Usp40Q8BWR4 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC9.43□□□□□ -0.9
Usp40Q8BWR4 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Usp40Q8BWR4 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Usp40Q8BWR4 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC9.43□□□□□ -0.9
Usp40Q8BWR4 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC9.43□□□□□ -0.9
Usp40Q8BWR4 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Usp40Q8BWR4 Gm45525-201ENSMUST00000210800 389 ntBASIC9.43□□□□□ -0.9
Usp40Q8BWR4 Gm18914-201ENSMUST00000214625 616 ntBASIC9.43□□□□□ -0.9
Usp40Q8BWR4 Gm5119-201ENSMUST00000215858 634 ntBASIC9.43□□□□□ -0.9
Usp40Q8BWR4 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Usp40Q8BWR4 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Usp40Q8BWR4 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Usp40Q8BWR4 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC9.43□□□□□ -0.9
Usp40Q8BWR4 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Usp40Q8BWR4 Gm37653-201ENSMUST00000195401 3578 ntBASIC9.43□□□□□ -0.9
Usp40Q8BWR4 Gm9226-201ENSMUST00000188352 3489 ntBASIC9.43□□□□□ -0.9
Usp40Q8BWR4 Gm21152-201ENSMUST00000190271 3483 ntBASIC9.43□□□□□ -0.9
Usp40Q8BWR4 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC9.43□□□□□ -0.9
Usp40Q8BWR4 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Usp40Q8BWR4 Gm38009-201ENSMUST00000194884 3341 ntBASIC9.43□□□□□ -0.9
Usp40Q8BWR4 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Usp40Q8BWR4 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC9.43□□□□□ -0.9
Usp40Q8BWR4 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Usp40Q8BWR4 Gm831-201ENSMUST00000149942 4517 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Usp40Q8BWR4 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Usp40Q8BWR4 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC9.43□□□□□ -0.9
Usp40Q8BWR4 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Usp40Q8BWR4 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Usp40Q8BWR4 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Usp40Q8BWR4 Gm43029-201ENSMUST00000201829 1535 ntBASIC9.42□□□□□ -0.9
Usp40Q8BWR4 Gm38386-201ENSMUST00000194293 3421 ntBASIC9.42□□□□□ -0.9
Usp40Q8BWR4 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC9.42□□□□□ -0.9
Usp40Q8BWR4 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Usp40Q8BWR4 AC140393.3-201ENSMUST00000228396 1352 ntBASIC9.42□□□□□ -0.9
Usp40Q8BWR4 AC161247.1-201ENSMUST00000217744 2295 ntBASIC9.42□□□□□ -0.9
Usp40Q8BWR4 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC9.42□□□□□ -0.9
Usp40Q8BWR4 Gm14613-201ENSMUST00000122239 752 ntBASIC9.42□□□□□ -0.9
Usp40Q8BWR4 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC9.42□□□□□ -0.9
Usp40Q8BWR4 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC9.42□□□□□ -0.9
Usp40Q8BWR4 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Usp40Q8BWR4 Mir199b-201ENSMUST00000175066 110 ntBASIC9.42□□□□□ -0.9
Usp40Q8BWR4 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Usp40Q8BWR4 Mir7046-201ENSMUST00000183435 66 ntBASIC9.42□□□□□ -0.9
Usp40Q8BWR4 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC9.42□□□□□ -0.9
Usp40Q8BWR4 Gm45122-201ENSMUST00000206376 784 ntBASIC9.42□□□□□ -0.9
Usp40Q8BWR4 Gm10297-201ENSMUST00000207136 651 ntBASIC9.42□□□□□ -0.9
Usp40Q8BWR4 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC9.42□□□□□ -0.9
Usp40Q8BWR4 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC9.42□□□□□ -0.9
Usp40Q8BWR4 AC158954.1-201ENSMUST00000228272 1006 ntBASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms