Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Ccdc40Q8BI79 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC7.21□□□□□ -1.25
Ccdc40Q8BI79 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
Ccdc40Q8BI79 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Ccdc40Q8BI79 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Ccdc40Q8BI79 Gm16506-201ENSMUST00000165553 1405 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
Ccdc40Q8BI79 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Gm15739-201ENSMUST00000118049 872 ntBASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Gm11926-201ENSMUST00000118520 430 ntBASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Gm15616-201ENSMUST00000118662 375 ntBASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Gm12331-201ENSMUST00000119927 622 ntBASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Gm12879-201ENSMUST00000120003 1182 ntBASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Rps8-ps3-201ENSMUST00000121011 650 ntBASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Mir1903-201ENSMUST00000122574 80 ntBASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Gm21990-201ENSMUST00000124692 383 ntBASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Gm23222-201ENSMUST00000158117 76 ntBASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Gm17032-201ENSMUST00000164367 338 ntTSL 3 BASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Gm17047-201ENSMUST00000167709 430 ntBASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Gm44370-201ENSMUST00000175436 112 ntBASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Gm18752-201ENSMUST00000192876 608 ntBASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Gm37260-201ENSMUST00000193748 1251 ntBASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Gm19739-201ENSMUST00000195941 153 ntBASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Scn8a-207ENSMUST00000200959 587 ntTSL 3 BASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Gm44931-201ENSMUST00000206056 545 ntBASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Gm45319-201ENSMUST00000210220 318 ntBASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Gm45246-201ENSMUST00000210820 367 ntBASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Gm17611-202ENSMUST00000220613 814 ntBASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 B230303A05Rik-202ENSMUST00000220728 478 ntBASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Gm18601-201ENSMUST00000220831 634 ntBASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 AC140267.1-201ENSMUST00000226485 213 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 H2-M11-201ENSMUST00000041964 1006 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Gm5528-201ENSMUST00000076314 480 ntBASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Defa37-201ENSMUST00000084040 403 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Gm6679-201ENSMUST00000191467 1869 ntBASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Ccdc40Q8BI79 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 Gm44769-201ENSMUST00000206120 2809 ntBASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 Gm37067-201ENSMUST00000195730 1628 ntBASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 Gm7091-201ENSMUST00000116438 586 ntBASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 Gm4911-201ENSMUST00000119388 945 ntBASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 Gm13486-201ENSMUST00000119910 282 ntBASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 Pea15b-201ENSMUST00000182806 387 ntBASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 Gm5787-201ENSMUST00000183049 1038 ntBASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 Mir7029-201ENSMUST00000184777 61 ntBASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 Gm18428-201ENSMUST00000194986 791 ntBASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 Gm44258-201ENSMUST00000204925 301 ntBASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 Gm9240-201ENSMUST00000206527 742 ntBASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 Gm45739-201ENSMUST00000213094 388 ntBASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 RMST_1.1-203ENSMUST00000217866 775 ntTSL 3 BASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 AC129597.1-201ENSMUST00000223046 1234 ntBASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 CT030260.1-201ENSMUST00000223243 442 ntBASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 AC163660.1-201ENSMUST00000223696 818 ntBASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 AC165287.1-201ENSMUST00000224985 178 ntBASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 AC154646.1-201ENSMUST00000225011 1092 ntBASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 AC140451.1-201ENSMUST00000227984 737 ntBASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 Klk1b8-201ENSMUST00000072204 859 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 Gm42653-201ENSMUST00000200644 2839 ntBASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 AC163660.4-201ENSMUST00000224983 2171 ntBASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC7.2□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms