Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gm15999-201ENSMUST00000127317 1511 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Prpf38bQ80SY5 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
Prpf38bQ80SY5 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Prpf38bQ80SY5 Exoc3-201ENSMUST00000035934 4922 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Prpf38bQ80SY5 Rab7b-202ENSMUST00000064679 4498 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Prpf38bQ80SY5 Mtpn-201ENSMUST00000031866 3960 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Gm43328-201ENSMUST00000198544 1434 ntBASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Slc25a5-ps-203ENSMUST00000223928 1442 ntBASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Fam83b-202ENSMUST00000183437 3879 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Sh3bgrl2-201ENSMUST00000113215 4565 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 AC122356.1-202ENSMUST00000227328 2758 ntBASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Ppp2r5c-202ENSMUST00000109832 4108 ntTSL 2 BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Fbxw23-202ENSMUST00000198480 1388 ntBASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Gm43398-201ENSMUST00000196584 2742 ntBASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Mical2-201ENSMUST00000037991 3352 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Rc3h1-202ENSMUST00000161609 11006 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 1700029M20Rik-203ENSMUST00000153347 2963 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 D630045J12Rik-201ENSMUST00000117556 10916 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Gm6913-201ENSMUST00000100019 348 ntBASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Gm11907-201ENSMUST00000118918 1007 ntBASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Gm14712-201ENSMUST00000120195 772 ntBASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Gm11632-201ENSMUST00000145489 674 ntTSL 3 BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Gm26184-201ENSMUST00000157686 131 ntBASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Gm24962-201ENSMUST00000157917 109 ntBASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Gm25372-201ENSMUST00000158161 255 ntBASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Gm17044-201ENSMUST00000168549 828 ntBASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Gm22132-201ENSMUST00000175316 100 ntBASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 4930438E09Rik-201ENSMUST00000176841 776 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Gm24925-201ENSMUST00000178157 107 ntBASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Gm6230-201ENSMUST00000208077 780 ntBASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Cd37-208ENSMUST00000210372 960 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 AC122301.1-201ENSMUST00000219625 507 ntBASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 AC167364.2-201ENSMUST00000221226 1037 ntTSL 5 BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 AC117949.1-201ENSMUST00000225547 419 ntBASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 AC114916.1-201ENSMUST00000228465 494 ntBASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Dnajc5b-201ENSMUST00000029132 923 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Mir7b-201ENSMUST00000083557 111 ntBASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Ankrd27-206ENSMUST00000190503 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Med13l-202ENSMUST00000201010 7781 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Atl3-201ENSMUST00000025668 6376 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Neurod1-201ENSMUST00000041099 2729 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Gm37372-201ENSMUST00000193577 3311 ntBASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Armcx3-201ENSMUST00000081834 3327 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Atf7ip-201ENSMUST00000032335 8059 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 0610037L13Rik-212ENSMUST00000135454 2997 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Gbp11-201ENSMUST00000100960 2692 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Gm14445-201ENSMUST00000117051 1484 ntBASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Gm37403-201ENSMUST00000193775 3521 ntBASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Cbx3-204ENSMUST00000114446 1719 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Ltn1-201ENSMUST00000039449 7737 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Gm37735-201ENSMUST00000193995 1406 ntBASIC8.12□□□□□ -1.11
Prpf38bQ80SY5 Gm42576-201ENSMUST00000202336 2846 ntBASIC8.11□□□□□ -1.11
Prpf38bQ80SY5 Gm17575-201ENSMUST00000180437 1991 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Prpf38bQ80SY5 Mrps17-203ENSMUST00000119576 5061 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
Prpf38bQ80SY5 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Prpf38bQ80SY5 Yme1l1-201ENSMUST00000028117 4707 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Prpf38bQ80SY5 Brdt-202ENSMUST00000112677 1607 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Prpf38bQ80SY5 Trub1-201ENSMUST00000026072 4300 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Prpf38bQ80SY5 Gm37780-201ENSMUST00000194117 1873 ntBASIC8.11□□□□□ -1.11
Prpf38bQ80SY5 Gpnmb-201ENSMUST00000031840 3701 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Prpf38bQ80SY5 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Prpf38bQ80SY5 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
Prpf38bQ80SY5 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC8.11□□□□□ -1.11
Prpf38bQ80SY5 3632451O06Rik-201ENSMUST00000036972 8831 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Prpf38bQ80SY5 Mbd4-201ENSMUST00000032469 3614 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Prpf38bQ80SY5 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Prpf38bQ80SY5 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC8.11□□□□□ -1.11
Prpf38bQ80SY5 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Prpf38bQ80SY5 Gm14985-201ENSMUST00000118693 786 ntBASIC8.11□□□□□ -1.11
Prpf38bQ80SY5 Gm14528-201ENSMUST00000120615 231 ntBASIC8.11□□□□□ -1.11
Prpf38bQ80SY5 Gm23111-201ENSMUST00000122652 105 ntBASIC8.11□□□□□ -1.11
Prpf38bQ80SY5 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Prpf38bQ80SY5 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms