Protein–RNA interactions for Protein: Q6DIC0

Smarca2, Probable global transcription activator SNF2L2, mousemouse

Predictions only

Length 1,577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2Q6DIC0 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smarca2Q6DIC0 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Smarca2Q6DIC0 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Smarca2Q6DIC0 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Smarca2Q6DIC0 Rassf6-201ENSMUST00000031317 1958 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Smarca2Q6DIC0 Vmn1r51-203ENSMUST00000226542 4164 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 Gprin2-203ENSMUST00000226613 10354 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 Gm25795-201ENSMUST00000104421 132 ntBASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 AC172989.1-201ENSMUST00000226387 513 ntBASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 Plagl2-202ENSMUST00000109795 5571 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 Gm37100-201ENSMUST00000193344 1353 ntBASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 AC159308.1-201ENSMUST00000216615 1351 ntBASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 Gm38028-201ENSMUST00000193309 2169 ntTSL 5 BASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 Gm44863-201ENSMUST00000207613 1422 ntBASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 AC121793.2-201ENSMUST00000217127 2728 ntTSL 5 BASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 Cpsf2-201ENSMUST00000047357 5732 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 Rp1l1-201ENSMUST00000058229 6684 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 Ctnnd1-206ENSMUST00000111675 5089 ntTSL 5 BASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 AC163660.4-201ENSMUST00000224983 2171 ntBASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 Gm43679-201ENSMUST00000197051 3677 ntBASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 Cpb1-201ENSMUST00000011607 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 Zfp944-201ENSMUST00000115535 2784 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 Gm12565-201ENSMUST00000119004 649 ntBASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 Gm22552-201ENSMUST00000157796 337 ntBASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 Mir3473e-201ENSMUST00000183932 110 ntBASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 Gm29197-201ENSMUST00000185922 702 ntBASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 Gm17824-201ENSMUST00000197690 805 ntBASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 AC135353.1-201ENSMUST00000215330 630 ntBASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 AC154595.2-201ENSMUST00000225067 310 ntBASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 Pcbp2-202ENSMUST00000078404 2829 ntTSL 2 BASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 Adgrl2-214ENSMUST00000199238 4670 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 AC140393.3-201ENSMUST00000228396 1352 ntBASIC11.79□□□□□ -0.52
Smarca2Q6DIC0 Gpr35-203ENSMUST00000169198 4214 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smarca2Q6DIC0 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smarca2Q6DIC0 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Smarca2Q6DIC0 Olfr1425-202ENSMUST00000214918 2178 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Smarca2Q6DIC0 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smarca2Q6DIC0 Gm42972-201ENSMUST00000196937 5617 ntBASIC11.78□□□□□ -0.52
Smarca2Q6DIC0 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smarca2Q6DIC0 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smarca2Q6DIC0 Gm16139-201ENSMUST00000160015 420 ntBASIC11.78□□□□□ -0.52
Smarca2Q6DIC0 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Smarca2Q6DIC0 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smarca2Q6DIC0 AC157822.1-201ENSMUST00000196643 80 ntBASIC11.78□□□□□ -0.52
Smarca2Q6DIC0 Gm5853-201ENSMUST00000197183 632 ntBASIC11.78□□□□□ -0.52
Smarca2Q6DIC0 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Smarca2Q6DIC0 Gm42814-201ENSMUST00000199370 460 ntBASIC11.78□□□□□ -0.52
Smarca2Q6DIC0 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC11.78□□□□□ -0.52
Smarca2Q6DIC0 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC11.78□□□□□ -0.52
Smarca2Q6DIC0 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smarca2Q6DIC0 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smarca2Q6DIC0 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Smarca2Q6DIC0 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Smarca2Q6DIC0 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Smarca2Q6DIC0 Eya3-213ENSMUST00000180250 5020 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Smarca2Q6DIC0 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smarca2Q6DIC0 Zfp825-202ENSMUST00000202645 1406 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smarca2Q6DIC0 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smarca2Q6DIC0 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smarca2Q6DIC0 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smarca2Q6DIC0 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smarca2Q6DIC0 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smarca2Q6DIC0 Wee2-201ENSMUST00000038907 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smarca2Q6DIC0 Ccdc186-202ENSMUST00000118592 6445 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Smarca2Q6DIC0 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Smarca2Q6DIC0 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smarca2Q6DIC0 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Smarca2Q6DIC0 Rian-209ENSMUST00000182406 3476 ntBASIC11.77□□□□□ -0.53
Smarca2Q6DIC0 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smarca2Q6DIC0 Mir700-201ENSMUST00000102169 79 ntBASIC11.77□□□□□ -0.53
Smarca2Q6DIC0 Gm25917-201ENSMUST00000104267 130 ntBASIC11.77□□□□□ -0.53
Smarca2Q6DIC0 Gm14237-201ENSMUST00000122080 430 ntBASIC11.77□□□□□ -0.53
Smarca2Q6DIC0 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC11.77□□□□□ -0.53
Smarca2Q6DIC0 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC11.77□□□□□ -0.53
Smarca2Q6DIC0 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC11.77□□□□□ -0.53
Smarca2Q6DIC0 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC11.77□□□□□ -0.53
Smarca2Q6DIC0 Gm9597-201ENSMUST00000171913 602 ntBASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms