Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 n-R5s156-201ENSMUST00000083377 105 ntBASIC8.27□□□□□ -1.09
Gm28047Q3US59 Gm22865-201ENSMUST00000083949 214 ntBASIC8.27□□□□□ -1.09
Gm28047Q3US59 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Gm28047Q3US59 Gm45177-201ENSMUST00000209104 2307 ntBASIC8.27□□□□□ -1.09
Gm28047Q3US59 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Gm28047Q3US59 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Gm28047Q3US59 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Gm28047Q3US59 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC8.27□□□□□ -1.09
Gm28047Q3US59 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
Gm28047Q3US59 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC8.27□□□□□ -1.09
Gm28047Q3US59 Gm45793-201ENSMUST00000207900 1342 ntBASIC8.27□□□□□ -1.09
Gm28047Q3US59 Gm2108-201ENSMUST00000165058 2177 ntBASIC8.27□□□□□ -1.09
Gm28047Q3US59 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Gm28047Q3US59 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Gm28047Q3US59 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Gm28047Q3US59 Olfr119-202ENSMUST00000213732 1722 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Gm28047Q3US59 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Gm28047Q3US59 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC8.26□□□□□ -1.09
Gm28047Q3US59 Zfp85os-201ENSMUST00000049518 2624 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Gm28047Q3US59 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Gm28047Q3US59 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Gm28047Q3US59 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Gm28047Q3US59 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Gm28047Q3US59 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Gm28047Q3US59 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Gm28047Q3US59 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Gm28047Q3US59 Gm24373-201ENSMUST00000104393 132 ntBASIC8.26□□□□□ -1.09
Gm28047Q3US59 Elavl2-206ENSMUST00000107116 1282 ntTSL 5 BASIC8.26□□□□□ -1.09
Gm28047Q3US59 Gm7910-201ENSMUST00000117896 835 ntBASIC8.26□□□□□ -1.09
Gm28047Q3US59 Gm13006-201ENSMUST00000118683 214 ntBASIC8.26□□□□□ -1.09
Gm28047Q3US59 Gm15238-201ENSMUST00000119938 1296 ntBASIC8.26□□□□□ -1.09
Gm28047Q3US59 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Gm28047Q3US59 Gm17973-201ENSMUST00000174509 520 ntBASIC8.26□□□□□ -1.09
Gm28047Q3US59 Mir199b-201ENSMUST00000175066 110 ntBASIC8.26□□□□□ -1.09
Gm28047Q3US59 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC8.26□□□□□ -1.09
Gm28047Q3US59 Gm2877-201ENSMUST00000178248 1204 ntBASIC8.26□□□□□ -1.09
Gm28047Q3US59 Gm8324-201ENSMUST00000178911 1204 ntBASIC8.26□□□□□ -1.09
Gm28047Q3US59 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Gm28047Q3US59 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC8.26□□□□□ -1.09
Gm28047Q3US59 Gm2617-201ENSMUST00000185690 1066 ntBASIC8.26□□□□□ -1.09
Gm28047Q3US59 Gm8524-201ENSMUST00000186232 379 ntBASIC8.26□□□□□ -1.09
Gm28047Q3US59 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Gm28047Q3US59 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC8.26□□□□□ -1.09
Gm28047Q3US59 Gm28546-201ENSMUST00000188221 615 ntBASIC8.26□□□□□ -1.09
Gm28047Q3US59 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Gm28047Q3US59 Gm37689-201ENSMUST00000193139 275 ntBASIC8.26□□□□□ -1.09
Gm28047Q3US59 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC8.26□□□□□ -1.09
Gm28047Q3US59 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC8.26□□□□□ -1.09
Gm28047Q3US59 Gm8920-201ENSMUST00000196153 924 ntBASIC8.26□□□□□ -1.09
Gm28047Q3US59 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Gm28047Q3US59 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Gm28047Q3US59 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC8.26□□□□□ -1.09
Gm28047Q3US59 Gm40538-201ENSMUST00000220610 578 ntTSL 5 BASIC8.26□□□□□ -1.09
Gm28047Q3US59 AC117656.3-205ENSMUST00000224606 1205 ntBASIC8.26□□□□□ -1.09
Gm28047Q3US59 CT030254.1-201ENSMUST00000225450 1078 ntBASIC8.26□□□□□ -1.09
Gm28047Q3US59 AC121960.3-201ENSMUST00000227077 623 ntBASIC8.26□□□□□ -1.09
Gm28047Q3US59 AC102603.1-201ENSMUST00000227481 584 ntBASIC8.26□□□□□ -1.09
Gm28047Q3US59 Cldn10-202ENSMUST00000071546 1031 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Gm28047Q3US59 Gm25475-201ENSMUST00000082825 180 ntBASIC8.26□□□□□ -1.09
Gm28047Q3US59 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Gm28047Q3US59 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Gm28047Q3US59 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Gm28047Q3US59 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Gm28047Q3US59 Gm43581-201ENSMUST00000196766 2864 ntBASIC8.26□□□□□ -1.09
Gm28047Q3US59 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Gm28047Q3US59 Gm45172-201ENSMUST00000206054 1301 ntBASIC8.26□□□□□ -1.09
Gm28047Q3US59 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Gm28047Q3US59 Gm44185-201ENSMUST00000204539 3307 ntBASIC8.26□□□□□ -1.09
Gm28047Q3US59 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
Gm28047Q3US59 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Gm28047Q3US59 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Gm28047Q3US59 Gm42996-201ENSMUST00000196116 1636 ntBASIC8.25□□□□□ -1.09
Gm28047Q3US59 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Gm28047Q3US59 AC154747.4-203ENSMUST00000225893 1384 ntBASIC8.25□□□□□ -1.09
Gm28047Q3US59 Gm17791-201ENSMUST00000185660 1501 ntBASIC8.25□□□□□ -1.09
Gm28047Q3US59 AC111010.1-203ENSMUST00000227287 1548 ntBASIC8.25□□□□□ -1.09
Gm28047Q3US59 Gm44101-201ENSMUST00000203951 2221 ntBASIC8.25□□□□□ -1.09
Gm28047Q3US59 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC8.25□□□□□ -1.09
Gm28047Q3US59 Keg1-201ENSMUST00000025598 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Gm28047Q3US59 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Gm28047Q3US59 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
Gm28047Q3US59 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Gm28047Q3US59 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Gm28047Q3US59 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Gm28047Q3US59 Rps6-ps3-201ENSMUST00000118010 750 ntBASIC8.25□□□□□ -1.09
Gm28047Q3US59 Gm6491-201ENSMUST00000118273 990 ntBASIC8.25□□□□□ -1.09
Gm28047Q3US59 Gm10639-201ENSMUST00000119823 993 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Gm28047Q3US59 Gm15488-201ENSMUST00000121682 670 ntBASIC8.25□□□□□ -1.09
Gm28047Q3US59 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Gm28047Q3US59 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC8.25□□□□□ -1.09
Gm28047Q3US59 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC8.25□□□□□ -1.09
Gm28047Q3US59 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC8.25□□□□□ -1.09
Gm28047Q3US59 2610035D17Rik-204ENSMUST00000150712 947 ntTSL 2 BASIC8.25□□□□□ -1.09
Gm28047Q3US59 Gm22882-201ENSMUST00000157749 124 ntBASIC8.25□□□□□ -1.09
Gm28047Q3US59 Gm23027-201ENSMUST00000158771 158 ntBASIC8.25□□□□□ -1.09
Gm28047Q3US59 Gm7991-201ENSMUST00000168668 591 ntBASIC8.25□□□□□ -1.09
Gm28047Q3US59 Gm6536-201ENSMUST00000171180 615 ntBASIC8.25□□□□□ -1.09
Gm28047Q3US59 Gm7393-201ENSMUST00000172650 739 ntBASIC8.25□□□□□ -1.09
Gm28047Q3US59 Vmn1r-ps18-201ENSMUST00000176901 876 ntBASIC8.25□□□□□ -1.09
Gm28047Q3US59 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 117 ms