Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Gm13451-201ENSMUST00000117649 592 ntBASIC9.09□□□□□ -0.95
Sf3b2Q3UJB0 Gm12618-201ENSMUST00000121754 483 ntBASIC9.09□□□□□ -0.95
Sf3b2Q3UJB0 Gm13237-201ENSMUST00000122151 635 ntBASIC9.09□□□□□ -0.95
Sf3b2Q3UJB0 Gm22275-201ENSMUST00000122470 310 ntBASIC9.09□□□□□ -0.95
Sf3b2Q3UJB0 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC9.09□□□□□ -0.95
Sf3b2Q3UJB0 Gm23799-201ENSMUST00000175559 120 ntBASIC9.09□□□□□ -0.95
Sf3b2Q3UJB0 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sf3b2Q3UJB0 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC9.09□□□□□ -0.95
Sf3b2Q3UJB0 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Sf3b2Q3UJB0 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Sf3b2Q3UJB0 Gm3351-201ENSMUST00000193454 505 ntBASIC9.09□□□□□ -0.95
Sf3b2Q3UJB0 Gm44561-201ENSMUST00000208869 264 ntBASIC9.09□□□□□ -0.95
Sf3b2Q3UJB0 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sf3b2Q3UJB0 Nqo2-204ENSMUST00000222740 995 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sf3b2Q3UJB0 AC113031.1-201ENSMUST00000227400 432 ntBASIC9.09□□□□□ -0.95
Sf3b2Q3UJB0 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC9.09□□□□□ -0.95
Sf3b2Q3UJB0 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Sf3b2Q3UJB0 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Sf3b2Q3UJB0 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC9.09□□□□□ -0.95
Sf3b2Q3UJB0 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
Sf3b2Q3UJB0 Nutm1-201ENSMUST00000043970 3731 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sf3b2Q3UJB0 Olfr449-204ENSMUST00000214687 1921 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
Sf3b2Q3UJB0 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Sf3b2Q3UJB0 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sf3b2Q3UJB0 AC093043.2-201ENSMUST00000228616 2017 ntBASIC9.09□□□□□ -0.95
Sf3b2Q3UJB0 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Sf3b2Q3UJB0 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Sf3b2Q3UJB0 Rbpj-201ENSMUST00000037618 5459 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Sf3b2Q3UJB0 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC9.08□□□□□ -0.96
Sf3b2Q3UJB0 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Sf3b2Q3UJB0 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Sf3b2Q3UJB0 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Sf3b2Q3UJB0 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Sf3b2Q3UJB0 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Sf3b2Q3UJB0 Unc5c-204ENSMUST00000130636 3595 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Sf3b2Q3UJB0 Gm8250-201ENSMUST00000117398 774 ntBASIC9.08□□□□□ -0.96
Sf3b2Q3UJB0 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC9.08□□□□□ -0.96
Sf3b2Q3UJB0 Gm24719-201ENSMUST00000157520 110 ntBASIC9.08□□□□□ -0.96
Sf3b2Q3UJB0 Gm25675-201ENSMUST00000174979 118 ntBASIC9.08□□□□□ -0.96
Sf3b2Q3UJB0 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC9.08□□□□□ -0.96
Sf3b2Q3UJB0 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC9.08□□□□□ -0.96
Sf3b2Q3UJB0 Gm43555-201ENSMUST00000196588 310 ntBASIC9.08□□□□□ -0.96
Sf3b2Q3UJB0 Gm5717-201ENSMUST00000198243 1062 ntBASIC9.08□□□□□ -0.96
Sf3b2Q3UJB0 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC9.08□□□□□ -0.96
Sf3b2Q3UJB0 Gm45514-201ENSMUST00000211531 689 ntBASIC9.08□□□□□ -0.96
Sf3b2Q3UJB0 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC9.08□□□□□ -0.96
Sf3b2Q3UJB0 AC158750.1-201ENSMUST00000226163 634 ntBASIC9.08□□□□□ -0.96
Sf3b2Q3UJB0 AC164436.1-201ENSMUST00000227074 772 ntBASIC9.08□□□□□ -0.96
Sf3b2Q3UJB0 Olfr559-201ENSMUST00000084816 1022 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Sf3b2Q3UJB0 Gm10205-201ENSMUST00000087431 234 ntBASIC9.08□□□□□ -0.96
Sf3b2Q3UJB0 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Sf3b2Q3UJB0 Ptpro-207ENSMUST00000203914 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Sf3b2Q3UJB0 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Sf3b2Q3UJB0 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Sf3b2Q3UJB0 Inpp5d-211ENSMUST00000170300 3942 ntTSL 2 BASIC9.08□□□□□ -0.96
Sf3b2Q3UJB0 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Sf3b2Q3UJB0 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Sf3b2Q3UJB0 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Sf3b2Q3UJB0 Tmprss11g-201ENSMUST00000134179 2873 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Sf3b2Q3UJB0 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Sf3b2Q3UJB0 4921517D22Rik-201ENSMUST00000061597 3149 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Sf3b2Q3UJB0 Calcr-202ENSMUST00000115622 3721 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Sf3b2Q3UJB0 Gm28322-201ENSMUST00000185627 1475 ntBASIC9.08□□□□□ -0.96
Sf3b2Q3UJB0 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Sf3b2Q3UJB0 Muc6-203ENSMUST00000190907 8757 ntAPPRIS P5 TSL 5 BASIC9.08□□□□□ -0.96
Sf3b2Q3UJB0 Fer1l6-203ENSMUST00000161028 5714 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Sf3b2Q3UJB0 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC9.08□□□□□ -0.96
Sf3b2Q3UJB0 AC153143.2-201ENSMUST00000220999 1804 ntBASIC9.08□□□□□ -0.96
Sf3b2Q3UJB0 A930030B08Rik-201ENSMUST00000207625 3965 ntBASIC9.07□□□□□ -0.96
Sf3b2Q3UJB0 Gm37499-201ENSMUST00000194683 3478 ntBASIC9.07□□□□□ -0.96
Sf3b2Q3UJB0 Arfgef1-203ENSMUST00000131556 3424 ntTSL 5 BASIC9.07□□□□□ -0.96
Sf3b2Q3UJB0 Nyap2-201ENSMUST00000068275 4919 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Sf3b2Q3UJB0 Fmo5-202ENSMUST00000107049 2583 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Sf3b2Q3UJB0 Ccdc114-203ENSMUST00000210602 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Sf3b2Q3UJB0 Musk-208ENSMUST00000179951 3376 ntTSL 5 BASIC9.07□□□□□ -0.96
Sf3b2Q3UJB0 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC9.07□□□□□ -0.96
Sf3b2Q3UJB0 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Sf3b2Q3UJB0 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Sf3b2Q3UJB0 Gm6693-201ENSMUST00000189583 813 ntBASIC9.07□□□□□ -0.96
Sf3b2Q3UJB0 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC9.07□□□□□ -0.96
Sf3b2Q3UJB0 Gm37430-201ENSMUST00000193039 196 ntBASIC9.07□□□□□ -0.96
Sf3b2Q3UJB0 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC9.07□□□□□ -0.96
Sf3b2Q3UJB0 Gm32983-201ENSMUST00000208500 505 ntBASIC9.07□□□□□ -0.96
Sf3b2Q3UJB0 Gm45690-201ENSMUST00000210775 246 ntBASIC9.07□□□□□ -0.96
Sf3b2Q3UJB0 Gm35619-201ENSMUST00000222548 600 ntBASIC9.07□□□□□ -0.96
Sf3b2Q3UJB0 AL591207.2-201ENSMUST00000222991 337 ntBASIC9.07□□□□□ -0.96
Sf3b2Q3UJB0 AC123656.1-201ENSMUST00000227121 581 ntBASIC9.07□□□□□ -0.96
Sf3b2Q3UJB0 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC9.07□□□□□ -0.96
Sf3b2Q3UJB0 Gm44194-201ENSMUST00000204222 3229 ntBASIC9.07□□□□□ -0.96
Sf3b2Q3UJB0 Spag11b-202ENSMUST00000110767 1740 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Sf3b2Q3UJB0 Naip2-202ENSMUST00000117913 4823 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Sf3b2Q3UJB0 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Sf3b2Q3UJB0 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Sf3b2Q3UJB0 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Sf3b2Q3UJB0 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Sf3b2Q3UJB0 Gm37043-201ENSMUST00000194609 3105 ntBASIC9.07□□□□□ -0.96
Sf3b2Q3UJB0 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Sf3b2Q3UJB0 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC9.06□□□□□ -0.96
Sf3b2Q3UJB0 Il31ra-206ENSMUST00000224510 2946 ntAPPRIS ALT2 BASIC9.06□□□□□ -0.96
Sf3b2Q3UJB0 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 106.3 ms