Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC6.41□□□□□ -1.38
Col8a1Q00780 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC6.41□□□□□ -1.38
Col8a1Q00780 Gm29008-201ENSMUST00000189387 298 ntBASIC6.41□□□□□ -1.38
Col8a1Q00780 Gm19124-201ENSMUST00000191041 832 ntBASIC6.41□□□□□ -1.38
Col8a1Q00780 Gm29018-202ENSMUST00000191356 313 ntTSL 3 BASIC6.41□□□□□ -1.38
Col8a1Q00780 Gm7115-201ENSMUST00000193706 832 ntBASIC6.41□□□□□ -1.38
Col8a1Q00780 Ighv1-14-201ENSMUST00000194015 402 ntBASIC6.41□□□□□ -1.38
Col8a1Q00780 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC6.41□□□□□ -1.38
Col8a1Q00780 Gm44282-201ENSMUST00000203199 190 ntBASIC6.41□□□□□ -1.38
Col8a1Q00780 Gm44227-201ENSMUST00000203576 241 ntBASIC6.41□□□□□ -1.38
Col8a1Q00780 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC6.41□□□□□ -1.38
Col8a1Q00780 Gm44694-201ENSMUST00000205317 1298 ntBASIC6.41□□□□□ -1.38
Col8a1Q00780 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC6.41□□□□□ -1.38
Col8a1Q00780 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Col8a1Q00780 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC6.41□□□□□ -1.38
Col8a1Q00780 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col8a1Q00780 AL929417.1-201ENSMUST00000214901 124 ntBASIC6.41□□□□□ -1.38
Col8a1Q00780 Gm8512-201ENSMUST00000215367 471 ntBASIC6.41□□□□□ -1.38
Col8a1Q00780 AC127224.1-201ENSMUST00000218094 453 ntBASIC6.41□□□□□ -1.38
Col8a1Q00780 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC6.41□□□□□ -1.38
Col8a1Q00780 AC134917.2-201ENSMUST00000223354 124 ntBASIC6.41□□□□□ -1.38
Col8a1Q00780 AC114008.1-201ENSMUST00000226193 937 ntBASIC6.41□□□□□ -1.38
Col8a1Q00780 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col8a1Q00780 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col8a1Q00780 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Col8a1Q00780 Tdgf1-ps2-201ENSMUST00000074412 505 ntBASIC6.41□□□□□ -1.38
Col8a1Q00780 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col8a1Q00780 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Col8a1Q00780 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC6.41□□□□□ -1.38
Col8a1Q00780 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Col8a1Q00780 Aktip-204ENSMUST00000120426 1687 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col8a1Q00780 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
Col8a1Q00780 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col8a1Q00780 Cep112-216ENSMUST00000182729 2850 ntTSL 5 BASIC6.41□□□□□ -1.38
Col8a1Q00780 Cdh16-204ENSMUST00000211903 2874 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col8a1Q00780 Cfl2-201ENSMUST00000078124 2940 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col8a1Q00780 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col8a1Q00780 Gm21719-202ENSMUST00000189073 1358 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Col8a1Q00780 Cyp2c29-201ENSMUST00000003137 1783 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col8a1Q00780 A730036I17Rik-201ENSMUST00000143346 3431 ntTSL 2 BASIC6.41□□□□□ -1.38
Col8a1Q00780 Zfp958-201ENSMUST00000073201 1401 ntTSL 5 BASIC6.41□□□□□ -1.38
Col8a1Q00780 9930111J21Rik1-202ENSMUST00000097494 3863 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Col8a1Q00780 Olfr156-204ENSMUST00000215406 1850 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Col8a1Q00780 AC159264.1-202ENSMUST00000224856 3162 ntBASIC6.41□□□□□ -1.38
Col8a1Q00780 Olfr1340-202ENSMUST00000213436 1948 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Col8a1Q00780 Ttc41-203ENSMUST00000217747 1949 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Col8a1Q00780 Gm5493-201ENSMUST00000182063 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Col8a1Q00780 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Col8a1Q00780 Acsm5-201ENSMUST00000066465 2981 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Col8a1Q00780 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Col8a1Q00780 Umps-201ENSMUST00000023510 3484 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Col8a1Q00780 Grik2-205ENSMUST00000218598 3245 ntTSL 5 BASIC6.4□□□□□ -1.38
Col8a1Q00780 Olfr237-ps1-202ENSMUST00000215911 4220 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Col8a1Q00780 Prepl-201ENSMUST00000072406 3294 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Col8a1Q00780 Nrf1-204ENSMUST00000115199 2296 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Col8a1Q00780 Gm8428-201ENSMUST00000159919 1784 ntBASIC6.4□□□□□ -1.38
Col8a1Q00780 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Col8a1Q00780 Gm15090-201ENSMUST00000118787 1196 ntBASIC6.4□□□□□ -1.38
Col8a1Q00780 Gm13130-201ENSMUST00000119195 1166 ntBASIC6.4□□□□□ -1.38
Col8a1Q00780 Gm14554-201ENSMUST00000119548 661 ntBASIC6.4□□□□□ -1.38
Col8a1Q00780 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Col8a1Q00780 Gm14065-201ENSMUST00000120848 585 ntBASIC6.4□□□□□ -1.38
Col8a1Q00780 Gm14463-201ENSMUST00000121117 498 ntBASIC6.4□□□□□ -1.38
Col8a1Q00780 Gm15089-201ENSMUST00000122332 1196 ntBASIC6.4□□□□□ -1.38
Col8a1Q00780 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC6.4□□□□□ -1.38
Col8a1Q00780 Gm25271-201ENSMUST00000157273 290 ntBASIC6.4□□□□□ -1.38
Col8a1Q00780 Gm22226-201ENSMUST00000157355 109 ntBASIC6.4□□□□□ -1.38
Col8a1Q00780 Gm23207-201ENSMUST00000158665 102 ntBASIC6.4□□□□□ -1.38
Col8a1Q00780 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Col8a1Q00780 Cd180-202ENSMUST00000167144 430 ntTSL 2 BASIC6.4□□□□□ -1.38
Col8a1Q00780 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC6.4□□□□□ -1.38
Col8a1Q00780 Gm18808-201ENSMUST00000173316 462 ntBASIC6.4□□□□□ -1.38
Col8a1Q00780 Gm18191-201ENSMUST00000174624 824 ntBASIC6.4□□□□□ -1.38
Col8a1Q00780 Gm23139-201ENSMUST00000179454 132 ntBASIC6.4□□□□□ -1.38
Col8a1Q00780 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC6.4□□□□□ -1.38
Col8a1Q00780 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Col8a1Q00780 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC6.4□□□□□ -1.38
Col8a1Q00780 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Col8a1Q00780 Gm37189-201ENSMUST00000192131 298 ntBASIC6.4□□□□□ -1.38
Col8a1Q00780 Gm37438-201ENSMUST00000192813 393 ntBASIC6.4□□□□□ -1.38
Col8a1Q00780 Gm37088-201ENSMUST00000193887 406 ntBASIC6.4□□□□□ -1.38
Col8a1Q00780 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC6.4□□□□□ -1.38
Col8a1Q00780 Gm43546-201ENSMUST00000196721 943 ntBASIC6.4□□□□□ -1.38
Col8a1Q00780 Gm6522-201ENSMUST00000197160 1203 ntBASIC6.4□□□□□ -1.38
Col8a1Q00780 Gm18593-201ENSMUST00000200754 1139 ntBASIC6.4□□□□□ -1.38
Col8a1Q00780 Gm42713-201ENSMUST00000202709 945 ntBASIC6.4□□□□□ -1.38
Col8a1Q00780 Clec2g-206ENSMUST00000204259 893 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Col8a1Q00780 Gm44764-202ENSMUST00000204912 671 ntTSL 3 BASIC6.4□□□□□ -1.38
Col8a1Q00780 Gm45136-201ENSMUST00000205793 943 ntBASIC6.4□□□□□ -1.38
Col8a1Q00780 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC6.4□□□□□ -1.38
Col8a1Q00780 Gm17911-201ENSMUST00000210806 877 ntBASIC6.4□□□□□ -1.38
Col8a1Q00780 Gm45900-201ENSMUST00000211879 409 ntBASIC6.4□□□□□ -1.38
Col8a1Q00780 Gm45908-201ENSMUST00000212977 1177 ntBASIC6.4□□□□□ -1.38
Col8a1Q00780 Gm39465-202ENSMUST00000215177 470 ntTSL 5 BASIC6.4□□□□□ -1.38
Col8a1Q00780 AC111046.1-201ENSMUST00000217715 412 ntBASIC6.4□□□□□ -1.38
Col8a1Q00780 Gm18972-201ENSMUST00000218873 630 ntBASIC6.4□□□□□ -1.38
Col8a1Q00780 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC6.4□□□□□ -1.38
Col8a1Q00780 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC6.4□□□□□ -1.38
Col8a1Q00780 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC6.4□□□□□ -1.38
Col8a1Q00780 AC154636.3-201ENSMUST00000221489 1214 ntBASIC6.4□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms